ggKbase home page

PLM3-1_170_b2_sep16_scaffold_65_124

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_36_10

near complete RP 35 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 38 / 38
Location: comp(105997..106434)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12P Tax=Thaumarchaeota archaeon N4 RepID=V6AR63_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 145.0
  • Bit_score: 266
  • Evalue 1.10e-68
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_60_A11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 145.0
  • Bit_score: 267
  • Evalue 6.60e-69
30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 145.0
  • Bit_score: 260
  • Evalue 1.60e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured marine thaumarchaeote AD1000_60_A11 → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 438
ATGGCAAAATCTCCACTTGGCTTATTTTCAGGAAGAGTTCTCAAAGATAAAAGAAAGAAACAACGATGGTCTATAGGAACTTACAAAAGAAGAAACCTCGGTCTTAACAAAAAAGCAGATCCATTAGGTGGTGCTCCACAAGCAAGAGGGATTGTTTTAGAAAAAGTAGGTATTGAAGCAAAACAGCCAAACTCCGCAGTAAGAAAATGTGTTCGTGTTCAACTCATAAAAAATGGAAAAACAGTTACTGCCTTTTTACCAAGAGATGGTGCAATGAATTTTGTTGATGAACATGACGAAGTACATGTTGAAGGAATGGGTGCAACTATGGGTGGCGCAATGGGAGATATTCCTGGCGTGAGATGGAAAGTCTTCAAAGTAAATGGCACTTCATTAAAAGAACTTGTATATGGAAAGAAAGAAAAACCTAGGAGATAG
PROTEIN sequence
Length: 146
MAKSPLGLFSGRVLKDKRKKQRWSIGTYKRRNLGLNKKADPLGGAPQARGIVLEKVGIEAKQPNSAVRKCVRVQLIKNGKTVTAFLPRDGAMNFVDEHDEVHVEGMGATMGGAMGDIPGVRWKVFKVNGTSLKELVYGKKEKPRR*