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PLM3-1_170_b2_sep16_scaffold_65

Search features with annotation key words

Displaying items 121-150 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_65_118
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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97381..100137
DNA (2757bp) protein (919aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
alaS; alanine--tRNA ligase (EC:6.1.1.7)
Alanyl-tRNA synthetase Tax=Thaumarchaeota archaeon N4 RepID=V6ARE6_9ARCH
PLM3-1_170_b2_sep16_scaffold_65_119

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100142..103021
DNA (2880bp) protein (960aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_87_A02.;"
hypothetical protein Tax=cellular organisms RepID=UPI00037D5D82
leucyl-tRNA synthetase
PLM3-1_170_b2_sep16_scaffold_65_120
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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103095..104102
DNA (1008bp) protein (336aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ARR0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05215.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
dehydrogenase (flavoprotein)-like protein
PLM3-1_170_b2_sep16_scaffold_65_121

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comp(104099..104806)
DNA (708bp) protein (236aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUP4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM03591.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_65_122

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104848..105165
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AS21_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF06958.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_197_F10.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_65_trna_3
unknown

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105259..105362
DNA (104bp)
transferRNA Pseudo
PLM3-1_170_b2_sep16_scaffold_65_123
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(105395..105994)
DNA (600bp) protein (200aa)
30S ribosomal protein S7 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
30S ribosomal protein S7
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_65_124

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comp(105997..106434)
DNA (438bp) protein (146aa)
30S ribosomal protein S12P Tax=Thaumarchaeota archaeon N4 RepID=V6AR63_9ARCH
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_60_A11.;"
30S ribosomal protein S12
PLM3-1_170_b2_sep16_scaffold_65_125
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(106441..106899)
DNA (459bp) protein (153aa)
NusA family protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
NusA family protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_65_126
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(106977..107297)
DNA (321bp) protein (107aa)
Ribosomal protein L7Ae Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E130_9ARCH
Ribosomal protein L7Ae {ECO:0000313|EMBL:EPA05030.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
Ribosomal protein L7Ae
PLM3-1_170_b2_sep16_scaffold_65_127
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(107290..111084)
DNA (3795bp) protein (1265aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Putative DNA-directed RNA polymerase subunit A Tax=Thaumarchaeota archaeon N4 RepID=V6ARQ1_9ARCH
bifunctional DNA-directed RNA polymerase subunit A'/A''
PLM3-1_170_b2_sep16_scaffold_65_128
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(111084..114431)
DNA (3348bp) protein (1116aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6) bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_65_129
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(114431..114682)
DNA (252bp) protein (84aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
DNA-directed RNA polymerase subunit H Tax=Thaumarchaeota archaeon N4 RepID=V6AS15_9ARCH
RNA polymerase Rpb5
PLM3-1_170_b2_sep16_scaffold_65_130
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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114858..115685
DNA (828bp) protein (276aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
conserved exported protein of unknown function
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_65_131
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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116170..117036
DNA (867bp) protein (289aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
conserved exported protein of unknown function
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_65_132
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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117111..117929
DNA (819bp) protein (273aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
conserved exported protein of unknown function
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_65_133
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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117998..118894
DNA (897bp) protein (299aa)
Uncharacterized protein Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A457_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX12241.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
PLM3-1_170_b2_sep16_scaffold_65_134
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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119219..119560
DNA (342bp) protein (114aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_65_135
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(119553..121118)
DNA (1566bp) protein (522aa)
Putative Radical SAM superfamily protein Tax=Thaumarchaeota archaeon N4 RepID=V6ARK4_9ARCH
Putative Radical SAM superfamily protein {ECO:0000313|EMBL:CDI05194.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Radical SAM protein
PLM3-1_170_b2_sep16_scaffold_65_136
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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121211..121933
DNA (723bp) protein (241aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
putative membrane protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_65_137
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(121923..122705)
DNA (783bp) protein (261aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_65_138
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(122742..123656)
DNA (915bp) protein (305aa)
Malate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00487}; EC=1.1.1.37 {ECO:0000255|HAMAP-Rule:MF_00487};; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
Malate dehydrogenase Tax=Nitrosopumilus maritimus (strain SCM1) RepID=MDH_NITMS
malate dehydrogenase
PLM3-1_170_b2_sep16_scaffold_65_139

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124103..125362
DNA (1260bp) protein (420aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_ANIW93I24 RepID=B3T2X8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF09244.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_35_E05.;"
TIGR00299 family protein
PLM3-1_170_b2_sep16_scaffold_65_140
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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125427..126014
DNA (588bp) protein (196aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AS10_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05198.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_65_141
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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126011..127063
DNA (1053bp) protein (351aa)
iscS; Cysteine desulfurase (EC:2.8.1.7)
cysteine desulfurase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_65_142
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(127074..130196)
DNA (3123bp) protein (1041aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_65_143
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(130285..131457)
DNA (1173bp) protein (391aa)
Metal cation transporter Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BAW6_9ARCH
putative metal cation transporter
Putative metal cation transporter {ECO:0000313|EMBL:AJM91614.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
PLM3-1_170_b2_sep16_scaffold_65_144
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(131458..132519)
DNA (1062bp) protein (354aa)
Multicopper oxidase type 3 Tax=Thaumarchaeota archaeon N4 RepID=V6AS02_9ARCH
Multicopper oxidase type 3 {ECO:0000313|EMBL:CDI05188.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Multicopper oxidase type 3
PLM3-1_170_b2_sep16_scaffold_65_145
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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132687..133157
DNA (471bp) protein (157aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
conserved exported protein of unknown function
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_65_146
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(133150..133434)
DNA (285bp) protein (95aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
Displaying items 121-150 of 188 in total

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