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PLM3-1_170_b2_sep16_scaffold_171_21

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_36_10

near complete RP 35 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 38 / 38
Location: 17214..17633

Top 3 Functional Annotations

Value Algorithm Source
AsnC family transcription regulator (LysM) {ECO:0000313|EMBL:AIF18277.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_82_C03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 139.0
  • Bit_score: 209
  • Evalue 1.60e-51
AsnC family transcriptional regulator bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 139.0
  • Bit_score: 205
  • Evalue 2.80e-50
putative HTH-type transcriptional regulator LysM similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 138.0
  • Bit_score: 197
  • Evalue 2.10e-48

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Taxonomy

uncultured marine thaumarchaeote KM3_82_C03 → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 420
ATGTCTAGAGACAAAACTGACGAATCTATAATTGAAATGCTAAAAAAAGATTCTAGAGAATCTTTTGTAGAGATAGGACAAAAGATTGGTCTTTCAGAATCAGCAGTAAGAAGAAGAGTAAAAAATCTTGTTGATGGTGGGATGATAAAAAAATTCACAATAGAAACTGGTGATGCAAATGCAACAAGTGCAATAATTTTGATCTCAGTTGATTCTTCAATTGATACATCAAAAGTTTCTGCAAAACTAACAAAGCTTCAAGGAGTACATATGATTTATGAAATAACTGGACAGTATGATATTGCAGTAATAATAAGAGCTCCAACTATTACTGACATTAACGCATGTATTGATTCTCTACGCAAGGTTCCAGGAGTGTTTGACACCAACACTATTATCATTTTACGTACTGTGACCTAA
PROTEIN sequence
Length: 140
MSRDKTDESIIEMLKKDSRESFVEIGQKIGLSESAVRRRVKNLVDGGMIKKFTIETGDANATSAIILISVDSSIDTSKVSAKLTKLQGVHMIYEITGQYDIAVIIRAPTITDINACIDSLRKVPGVFDTNTIIILRTVT*