ggKbase home page

PLM3-1_170_b2_sep16_scaffold_2750_1

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_36_10

near complete RP 35 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 38 / 38
Location: 1..297

Top 3 Functional Annotations

Value Algorithm Source
AsnC family transcription regulator Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KL90_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 98.0
  • Bit_score: 150
  • Evalue 7.40e-34
AsnC family transcription regulator {ECO:0000313|EMBL:EGG41897.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 98.0
  • Bit_score: 150
  • Evalue 1.00e-33
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 96.0
  • Bit_score: 109
  • Evalue 3.20e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrosoarchaeum limnia → Candidatus Nitrosoarchaeum → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 297
AGACTTGTCAACATTGGCTTGATAAAGGCAGTTTCACCTGTTTTAGACTTGGGAATGCTTGAAAACAAGACAAGTACAAGGCTTGATCACATACGTAACAAGACACTCAAGAATCATGACATAAAACTTGGTAAAGACATGATTGTGAGAATGTCATGCGATTACTGCCAAGGACCTGTGCATGAAAAACCAAGCATTCTAAAATTTGCAAACTTGGAGAGGTTTTTTTGTTGCACATCTTGTAAAACTTTGTACAAGGAAAAATACAAAGGCAGAATTGAATCATTATCAAATTAG
PROTEIN sequence
Length: 99
RLVNIGLIKAVSPVLDLGMLENKTSTRLDHIRNKTLKNHDIKLGKDMIVRMSCDYCQGPVHEKPSILKFANLERFFCCTSCKTLYKEKYKGRIESLSN*