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PLM3-1_170_b2_sep16_scaffold_2750

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2750_1
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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1..297
DNA (297bp) protein (99aa)
AsnC family transcription regulator Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KL90_9ARCH
AsnC family transcription regulator {ECO:0000313|EMBL:EGG41897.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
AsnC family transcriptional regulator
PLM3-1_170_b2_sep16_scaffold_2750_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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363..1283
DNA (921bp) protein (307aa)
BNR repeat-containing glycosyl hydrolase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
BNR repeat-containing glycosyl hydrolase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_2750_3
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1481..2098)
DNA (618bp) protein (206aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
type 11 methyltransferase Tax=Desulfovibrio longus RepID=UPI0003B527DC
type 11 methyltransferase
PLM3-1_170_b2_sep16_scaffold_2750_4
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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2287..2826
DNA (540bp) protein (180aa)
hypothetical protein Tax=Nitrosopumilus sp. SJ RepID=UPI0003688CBA
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AJM92912.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
PLM3-1_170_b2_sep16_scaffold_2750_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(3441..3779)
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AU38_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06251.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_2750_6
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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3844..4125
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUQ9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06250.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
PLM3-1_170_b2_sep16_scaffold_2750_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4362..6572)
DNA (2211bp) protein (737aa)
Putative copper amine oxidase-like protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAK1_NITGG
copper amine oxidase-like protein
Putative copper amine oxidase-like protein {ECO:0000313|EMBL:AFU58346.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2750_8
unknown

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6704..6946
DNA (243bp) protein (81aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2750_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6943..8019
DNA (1077bp) protein (359aa)
radical SAM protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rlmN; Ribosomal RNA large subunit methyltransferase N (EC:2.1.1.192)
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_2750_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8317..9042)
DNA (726bp) protein (242aa)
cysM1; putative cysteine synthase (EC:2.5.1.47)
Putative cysteine synthase {ECO:0000313|EMBL:AIC16006.1}; EC=2.5.1.47 {ECO:0000313|EMBL:AIC16006.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Putative cysteine synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I761_NITGG
PLM3-1_170_b2_sep16_scaffold_2750_11

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comp(8993..9874)
DNA (882bp) protein (294aa)
Pyridoxal-phosphate dependent protein Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E4Y3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKK98181.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cysteine synthase
Displaying 11 items

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