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PLM3-1_170_b2_sep16_scaffold_3329

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3329_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..450)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7L1_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM3-1_170_b2_sep16_scaffold_3329_2
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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691..1128
DNA (438bp) protein (146aa)
hypothetical protein bin=GWA2_OP3_52_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RBG_16_Ignavibacteria_35_7_curated
PLM3-1_170_b2_sep16_scaffold_3329_3
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1128..2039
DNA (912bp) protein (304aa)
seg bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Tax=CG_Ignavi_02
PLM3-1_170_b2_sep16_scaffold_3329_4
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(2040..2432)
DNA (393bp) protein (131aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AFZ32339.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AFZ32339.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
PAS/PAC sensor hybrid histidine kinase Tax=Gloeocapsa sp. PCC 7428 RepID=K9XJS4_9CHRO
PLM3-1_170_b2_sep16_scaffold_3329_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2873..3685
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKV9_IGNAJ
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_3329_6
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3693..4718
DNA (1026bp) protein (342aa)
Holliday junction ATP-dependent DNA helicase RuvB bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
ruvB; Holliday junction resolvasome helicase subunit
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_3329_7
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4946..6844
DNA (1899bp) protein (633aa)
Aminopeptidase N Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKV7_IGNAJ
Aminopeptidase N
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_3329_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6995..8086
DNA (1092bp) protein (364aa)
Rieske (2Fe-2S) domain-containing protein Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F2_9GAMM
(2Fe-2S)-binding protein
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:EIL93293.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PLM3-1_170_b2_sep16_scaffold_3329_9
unknown

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comp(8056..8220)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3329_10
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8250..8441
DNA (192bp) protein (64aa)
CsbD family protein Tax=Sphingobacterium sp. (strain 21) RepID=F4CCA5_SPHS2
CsbD family protein
CsbD family protein {ECO:0000313|EMBL:ADZ78698.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
PLM3-1_170_b2_sep16_scaffold_3329_11
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8523..8846)
DNA (324bp) protein (108aa)
Plasmid stabilization system Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YRF8_9CHLB bin=RAAC39 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_3329_12
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8869..9138)
DNA (270bp) protein (90aa)
Prevent-host-death family protein bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
prevent-host-death family protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_3329_13
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9210..10973)
DNA (1764bp) protein (588aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AM10_IGNAJ
hypothetical protein
Tax=CG_Ignavi_02
PLM3-1_170_b2_sep16_scaffold_3329_14
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11199..11495)
DNA (297bp) protein (99aa)
Two component regulator propeller domain protein bin=GWB2_Ignavibacteria_35_12 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=CG_Ignavi_01
PLM3-1_170_b2_sep16_scaffold_3329_15
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11881..12249
DNA (369bp) protein (123aa)
Tax=RBG_16_Planctomycetes_64_12_curated
PLM3-1_170_b2_sep16_scaffold_3329_16
unknown

Not on your lists

comp(12562..13605)
DNA (1044bp) protein (348aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3329_17
unknown

Not on your lists

comp(13574..14194)
DNA (621bp) protein (207aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3329_18
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14646..15260)
DNA (615bp) protein (205aa)
hypothetical protein Tax=Cytophaga aurantiaca RepID=UPI0003799758
Uncharacterized protein {ECO:0000313|EMBL:GAL87246.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_3329_19
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(15271..15441)
DNA (171bp) protein (57aa)
Endonuclease, putative bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Endonuclease
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
PLM3-1_170_b2_sep16_scaffold_3329_20
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15702..16343
DNA (642bp) protein (214aa)
putative lipoprotein; K02044 phosphonate transport system substrate-binding protein bin=BACIGN_2 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
putative lipoprotein
Tax=RBG_16_Ignavibacteria_34_14_curated
Displaying 20 items

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