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PLM3-1_170_b2_sep16_scaffold_3838

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3838_1
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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472..1575
DNA (1104bp) protein (368aa)
1,4-Alpha-glucan branching enzyme bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
glgB; 1,4-Alpha-glucan branching enzyme
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3-1_170_b2_sep16_scaffold_3838_2
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1626..3167
DNA (1542bp) protein (514aa)
1,4-Alpha-glucan branching enzyme bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
glgB; 1,4-Alpha-glucan branching enzyme
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_3838_3
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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3389..4573
DNA (1185bp) protein (395aa)
BNR/Asp-box repeat protein bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
BNR/Asp-box repeat-containing protein
Tax=GWA2_Bacteroidetes_32_17_curated
PLM3-1_170_b2_sep16_scaffold_3838_4
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4521..5489
DNA (969bp) protein (323aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AM10_IGNAJ
hypothetical protein
Tax=CG_Ignavi_02
PLM3-1_170_b2_sep16_scaffold_3838_5
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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5495..6805
DNA (1311bp) protein (437aa)
Putative aminopeptidase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3-1_170_b2_sep16_scaffold_3838_6
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6854..7609)
DNA (756bp) protein (252aa)
tRNA/rRNA methyltransferase (SpoU) bin=GWC2_OP3_44_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
TrmH family RNA methyltransferase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_3838_7
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7606..7947)
DNA (342bp) protein (114aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_3838_trna_1
unknown

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8291..8363
DNA (73bp)
transferRNA Thr
PLM3-1_170_b2_sep16_scaffold_3838_8
unknown

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8520..8702
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3838_9
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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8780..9391
DNA (612bp) protein (204aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_3838_10
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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9384..9794
DNA (411bp) protein (137aa)
id=3674525 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_3838_11
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9903..10385
DNA (483bp) protein (161aa)
High-affinity branched-chain amino acid transport ATP-binding protein braG Tax=uncultured Desulfobacterium sp. RepID=E1YMU8_9DELT
High-affinity branched-chain amino acid transport ATP-binding protein braG {ECO:0000313|EMBL:CBX31892.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
PLM3-1_170_b2_sep16_scaffold_3838_12
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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10654..11727
DNA (1074bp) protein (358aa)
Adenylate cyclase bin=GWF2_Ignavibacteria_35_20 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
family 3 adenylate cyclase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_3838_13
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11878..12084
DNA (207bp) protein (69aa)
Putative amidohydrolase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJ65_IGNAJ
amidohydrolase
Tax=RBG_16_Ignavibacteria_34_14_curated
Displaying 14 items

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