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PLM3-1_170_b2_sep16_scaffold_2150

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2150_1
unknown

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33..320
DNA (288bp) protein (96aa)
transmembrane_regions bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
PLM3-1_170_b2_sep16_scaffold_2150_2
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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320..682
DNA (363bp) protein (121aa)
Putative uncharacterized protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K4W3_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ27940.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
PLM3-1_170_b2_sep16_scaffold_2150_3
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(728..1015)
DNA (288bp) protein (96aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGE4_IGNAJ
ispD; 4-Diphosphocytidyl-2-methyl-D-erithritol synthase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2150_4
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(1333..2286)
DNA (954bp) protein (318aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
queA; S-adenosylmethionine:trna-ribosyltransferase-isomerase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2150_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2396..5173)
DNA (2778bp) protein (926aa)
Pyruvate phosphate dikinase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGE6_IGNAJ
ppdK; pyruvate, phosphate dikinase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2150_6
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5228..6271)
DNA (1044bp) protein (348aa)
ial:IALB_0342 lpxK; Tetraacyldisaccharide-1-P 4'-kinase; K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
tetraacyldisaccharide 4'-kinase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2150_7
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6284..6739)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGE8_IGNAJ
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2150_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6729..7871)
DNA (1143bp) protein (381aa)
Lipid-A-disaccharide synthase bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
lpxB; Lipid A disaccharide synthetase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2150_9
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7965..8555)
DNA (591bp) protein (197aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGF0_IGNAJ
protein-S-isoprenylcysteine methyltransferase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2150_10
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8563..9279)
DNA (717bp) protein (239aa)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGF1_IGNAJ
mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2150_11
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9283..12897)
DNA (3615bp) protein (1205aa)
Chromosome partition protein Smc bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
smc; Chromosome segregation protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2150_12
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12897..15500)
DNA (2604bp) protein (868aa)
ial:IALB_0349 Beta-galactosidase/beta-glucuronidase domain protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
beta-galactosidase/beta-glucuronidase domain-containing protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2150_13
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15637..16392)
DNA (756bp) protein (252aa)
Triosephosphate isomerase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AP96_IGNAJ
tpiA; triosephosphate isomerase
Tax=GWB2_Ignavibacteria_35_6b_curated
PLM3-1_170_b2_sep16_scaffold_2150_14
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16671..17540
DNA (870bp) protein (290aa)
ial:IALB_3101 Major facilitator superfamily permease bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Major facilitator superfamily permease
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3-1_170_b2_sep16_scaffold_2150_15
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

17744..20920
DNA (3177bp) protein (1059aa)
OmpA-related protein bin=GWF2_Ignavibacteria_35_20 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
PLM3-1_170_b2_sep16_scaffold_2150_16
unknown

Not on your lists

comp(20870..20968)
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2150_17
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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21113..21361
DNA (249bp) protein (83aa)
7-cyano-7-deazaguanine synthase Tax=Melioribacter roseus (strain P3M) RepID=I6YW17_MELRP
ExsB family transcriptional regulator
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
Displaying 17 items

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