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PLM3-1_170_b2_sep16_scaffold_2424

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2424_1
unknown

Not on your lists

comp(3..425)
DNA (423bp) protein (141aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2424_2
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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540..1028
DNA (489bp) protein (163aa)
Thiol-disulfide isomerase/thioredoxin domain protein bin=GWF2_Melioribacter_38_21 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
thiol-disulfide isomerase/thioredoxin domain-containing protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_2424_3
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(1047..2420)
DNA (1374bp) protein (458aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2424_4
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2690..3091)
DNA (402bp) protein (134aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_2424_5
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3390..4877
DNA (1488bp) protein (496aa)
hypothetical protein Tax=unclassified candidate division KSB1 RepID=UPI00036918F7
pncB; nicotinate phosphoribosyltransferase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_2424_6
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4982..5239)
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AIV2_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH48909.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM3-1_170_b2_sep16_scaffold_2424_7
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5296..5550)
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Melioribacter roseus (strain P3M) RepID=I6YU32_MELRP
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2424_8
unknown

Not on your lists

5722..6381
DNA (660bp) protein (220aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2424_9
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7026..8423)
DNA (1398bp) protein (466aa)
Peptidase M16 domain protein bin=GWF2_Ignavibacteria_35_20 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
peptidase M16
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2424_10
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8427..9734)
DNA (1308bp) protein (436aa)
Putative Zn-dependent peptidase bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Zn-dependent peptidase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2424_11
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9955..10608
DNA (654bp) protein (218aa)
Putative phosphatase bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
phosphatase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2424_12
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10773..11165
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DJ97_9BACT
HEPN domain-containing protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2424_13
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11141..11455
DNA (315bp) protein (105aa)
Predicted nucleotidyltransferases bin=GWF2_Bacteroidetes_38_335 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
DNA polymerase beta domain-containing protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2424_14
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11604..12158
DNA (555bp) protein (185aa)
Probable DNA repair protein C900_00072 Tax=Fulvivirga imtechensis AK7 RepID=L8K0I0_9BACT
ykoV; putative DNA repair protein YkoV
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_2424_15
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12145..12402
DNA (258bp) protein (86aa)
Probable DNA repair protein C900_00072 Tax=Fulvivirga imtechensis AK7 RepID=L8K0I0_9BACT
Tax=RBG_16_Ignavibacteria_34_14_curated
Displaying 15 items

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