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PLM3-1_170_b2_sep16_scaffold_2884

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2884_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(69..431)
DNA (363bp) protein (121aa)
Regulatory protein, FmdB family bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2884_2
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

728..1186
DNA (459bp) protein (153aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_2884_3
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1309..2250
DNA (942bp) protein (314aa)
Ribose-phosphate pyrophosphokinase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
ribose-phosphate pyrophosphokinase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2884_4
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


2275..2919
DNA (645bp) protein (215aa)
50S ribosomal protein L25 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
rplY; 50S ribosomal protein L25P
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2884_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2923..3501
DNA (579bp) protein (193aa)
Peptidyl-tRNA hydrolase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AH46_IGNAJ
pth; PTH1 family peptidyl-tRNA hydrolase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2884_6
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3575..5959
DNA (2385bp) protein (795aa)
inorganic diphosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CKM6_SYNLT
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_2884_7
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


6161..6580
DNA (420bp) protein (140aa)
30S ribosomal protein S6 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AH48_IGNAJ
rpsF; 30S ribosomal protein S6
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2884_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6606..7082
DNA (477bp) protein (159aa)
Single-stranded DNA-binding protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AH49_IGNAJ
ssb; ssDNA-binding protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2884_9
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


7094..7324
DNA (231bp) protein (77aa)
30S ribosomal protein S18 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AH50_IGNAJ
rpsR; 30S ribosomal protein S18
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2884_10
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


7344..7787
DNA (444bp) protein (148aa)
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2884_11
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


comp(7861..8124)
DNA (264bp) protein (88aa)
rpmB; 50S ribosomal protein L28P
50S ribosomal protein L28 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2884_12
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8344..8955
DNA (612bp) protein (204aa)
Sua5/YciO/YrdC/YwlC family protein bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Sua5/YciO/YrdC/YwlC family protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2884_13
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8972..9415)
DNA (444bp) protein (148aa)
All0475 protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
short-chain alcohol dehydrogenase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2884_14
unknown

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9551..9769
DNA (219bp) protein (73aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2884_15
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9845..11086)
DNA (1242bp) protein (414aa)
Putative uncharacterized protein bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
Displaying 15 items

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