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PLM3-1_170_b2_sep16_scaffold_296

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_296_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1..297
DNA (297bp) protein (99aa)
ial:IALB_3146 dat; D-alanine transaminase; K00824 D-alanine transaminase [EC:2.6.1.21] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
dat; D-alanine transaminase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_2
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(294..506)
DNA (213bp) protein (71aa)
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_3
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(880..1311)
DNA (432bp) protein (144aa)
PAS domain S-box protein Tax=Leptospira inadai serovar Lyme str. 10 RepID=V6HM69_9LEPT
histidine kinase and response regulator hybrid protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_4
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1681..2832)
DNA (1152bp) protein (384aa)
Spore coat protein (Inner) Tax=Melioribacter roseus (strain P3M) RepID=I6ZR22_MELRP
spore coat protein (inner)
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2835..3842)
DNA (1008bp) protein (336aa)
Uncharacterized protein Tax=Melioribacter roseus (strain P3M) RepID=I6ZZU9_MELRP
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_6
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3934..6258
DNA (2325bp) protein (775aa)
DNA polymerase bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
polB; DNA polymerase II
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_7
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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6282..7751
DNA (1470bp) protein (490aa)
IgA Peptidase M64 superfamily bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
MEROPS family M64 IgA peptidase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7982..8842
DNA (861bp) protein (287aa)
DNA-directed RNA polymerase sigma subunit bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
DNA-directed RNA polymerase sigma subunit RpoD
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_9
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9011..9415
DNA (405bp) protein (135aa)
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_10
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9650..9910)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANA3_IGNAJ
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_11
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10078..10716)
DNA (639bp) protein (213aa)
Response regulator Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANA4_IGNAJ
response regulator
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_12
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10790..14029)
DNA (3240bp) protein (1080aa)
Putative periplasmic ligand-binding sensor domain protein bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
periplasmic ligand-binding sensor domain-containing protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_13
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14330..15403)
DNA (1074bp) protein (358aa)
Uncharacterized protein Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AMM1_FLELS
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_14
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15622..15885
DNA (264bp) protein (88aa)
Excinuclease abc c subunit domain protein Tax=Melioribacter roseus (strain P3M) RepID=I7A6E5_MELRP
excinuclease abc c subunit domain protein
Excinuclease abc c subunit domain protein {ECO:0000313|EMBL:AFN75436.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
PLM3-1_170_b2_sep16_scaffold_296_trna_1
unknown

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15864..15950
DNA (87bp)
transferRNA Ser
PLM3-1_170_b2_sep16_scaffold_296_15
unknown

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16094..16618
DNA (525bp) protein (175aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_296_16
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

16664..18970
DNA (2307bp) protein (769aa)
TonB-dependent receptor plug Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZ59_CHLT3
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACF13752.1}; Flags: Precursor;; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
PLM3-1_170_b2_sep16_scaffold_296_17
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19302..19661)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BXJ6_NITHN
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(19885..20319)
DNA (435bp) protein (145aa)
yhcV_[H]; CBS domain containing membrane protein bin=bin3_NC10 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative signal transduction protein with CBS domains
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_296_19
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20559..21728)
DNA (1170bp) protein (390aa)
Uncharacterized protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U0P5_9CYAN
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM3-1_170_b2_sep16_scaffold_296_20
unknown

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21756..21935
DNA (180bp) protein (60aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_296_21
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22528..23658
DNA (1131bp) protein (377aa)
Adenylate cyclase Tax=Fulvivirga imtechensis AK7 RepID=L8JNA1_9BACT
adenylate cyclase-like protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_296_22
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

23715..24683
DNA (969bp) protein (323aa)
ial:IALB_1004 Zn-dependent membrane dipeptidase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
Displaying 23 items

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