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PLM3-1_170_b2_sep16_scaffold_677

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_677_1
unknown

Not on your lists

comp(3..314)
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_677_2
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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468..2081
DNA (1614bp) protein (538aa)
NAD(FAD)-dependent dehydrogenase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C334_DESTA
NAD(FAD)-dependent dehydrogenase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_677_3
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

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2344..2895
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Melioribacter roseus P3M RepID=I6Z6Y9_MELRP bin=RAAC39 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
PLM3-1_170_b2_sep16_scaffold_677_4
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3167..3619
DNA (453bp) protein (151aa)
yhcV_[H]; CBS domain containing membrane protein bin=bin3_NC10 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative signal transduction protein with CBS domains
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_677_5
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3725..4780
DNA (1056bp) protein (352aa)
ial:IALB_2668 DNA modification methylase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
DNA methylase N-4/N-6 domain-containing protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_677_6
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4798..5448
DNA (651bp) protein (217aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_677_7
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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5518..5805
DNA (288bp) protein (96aa)
Fibronectin type III domain protein bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3-1_170_b2_sep16_scaffold_677_8
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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5852..6364
DNA (513bp) protein (171aa)
Fibronectin type III domain protein bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_35_7_curated
PLM3-1_170_b2_sep16_scaffold_677_9
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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6555..7919
DNA (1365bp) protein (455aa)
Putative RNA-processing exonuclease bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
RNA-processing exonuclease
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_10
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8052..8459
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Bacillus cereus HuA3-9 RepID=R8CIJ9_BACCE
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_11
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8795..9373
DNA (579bp) protein (193aa)
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_12
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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9360..10061
DNA (702bp) protein (234aa)
ial:IALB_0403 Putative DNA alkylation repair enzyme bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
DNA alkylation repair enzyme
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_13
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10061..10543
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Fulvivirga imtechensis AK7 RepID=L8JQ77_9BACT
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_677_14
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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10700..11098
DNA (399bp) protein (133aa)
Putative translation initiation inhibitor, yjgF family Tax=Solitalea canadensis DSM 3403 RepID=H8KKY6_SOLCM bin=RAAC39 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria
Endoribonuclease L-PSP
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_15
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11384..12286
DNA (903bp) protein (301aa)
cmr:Cycma_0969 mechanosensitive ion channel protein MscS bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
small-conductance mechanosensitive channel
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_16
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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12273..13742
DNA (1470bp) protein (490aa)
Sodium proton antiporter bin=GWA2_Ignavibacteria_55_11 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
cvrA, nhaP2, ycgO; potassium/proton antiporter
Tax=GWA2_Ignavibacteria_54_16_curated
PLM3-1_170_b2_sep16_scaffold_677_17
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

13763..14008
DNA (246bp) protein (82aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_677_18
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14134..14592
DNA (459bp) protein (153aa)
hypothetical protein; K09748 ribosome maturation factor RimP bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_19
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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14608..15858
DNA (1251bp) protein (417aa)
Transcription elongation factor bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
transcription elongation factor
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_20
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15870..18389
DNA (2520bp) protein (840aa)
ial:IALB_0639 infB; Translation initiation factor 2; K02519 translation initiation factor IF-2 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
infB; translation initiation factor 2
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_21
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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18482..18838
DNA (357bp) protein (119aa)
Ribosome-binding factor A Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AH95_IGNAJ
rbfA; ribosome-binding factor A
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_22
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

18816..19523
DNA (708bp) protein (236aa)
tRNA pseudouridine synthase B bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
truB; tRNA pseudouridine synthase B
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_23
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19612..20550
DNA (939bp) protein (313aa)
ial:IALB_0642 ribF; Riboflavin kinase; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
ribF; riboflavin kinase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_24
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


20740..21003
DNA (264bp) protein (88aa)
30S ribosomal protein S15 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
rpsO; 30S ribosomal protein S15
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_677_25
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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21015..23141
DNA (2127bp) protein (709aa)
Polyribonucleotide nucleotidyltransferase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AH99_IGNAJ
pnp; Polyribonucleotide nucleotidyltransferase
Tax=RBG_16_Ignavibacteria_34_14_curated
Displaying 25 items

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