ggKbase home page

PLM3-1_170_b2_sep16_scaffold_1276

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1276_1
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2..601)
DNA (600bp) protein (200aa)
ial:IALB_2347 Putative periplasmic ligand-binding sensor domain protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
periplasmic ligand-binding sensor domain-containing protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_1276_2
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(757..1644)
DNA (888bp) protein (296aa)
ial:IALB_2347 Putative periplasmic ligand-binding sensor domain protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
periplasmic ligand-binding sensor domain-containing protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_1276_3
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1769..2239)
DNA (471bp) protein (157aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_1276_4
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2265..3098)
DNA (834bp) protein (278aa)
Putative PHP family metal-dependent phosphoesterase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
PHP family metal-dependent phosphoesterase
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
PLM3-1_170_b2_sep16_scaffold_1276_5
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3108..3791)
DNA (684bp) protein (228aa)
Crp/Fnr family transcriptional regulator bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Crp/Fnr family transcriptional regulator
Tax=CG_Ignavi_02
PLM3-1_170_b2_sep16_scaffold_1276_6
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4009..6099
DNA (2091bp) protein (697aa)
Parvulin-like peptidyl-prolyl isomerase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
ppiD; Parvulin-like peptidyl-prolyl isomerase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_1276_7
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6207..6923
DNA (717bp) protein (239aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_1276_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6982..7524
DNA (543bp) protein (181aa)
Shikimate kinase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
aro; shikimate kinase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_1276_9
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7529..8623
DNA (1095bp) protein (365aa)
3-dehydroquinate synthase bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
3-dehydroquinate synthase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_1276_10
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9166..10374)
DNA (1209bp) protein (403aa)
ial:IALB_0822 Signal transduction histidine kinase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Signal transduction histidine kinase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_1276_11
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10465..11736)
DNA (1272bp) protein (424aa)
Adenylosuccinate synthetase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
purA; adenylosuccinate synthase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_1276_12
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11832..12173)
DNA (342bp) protein (114aa)
Anti-sigma factor antagonist Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHS9_IGNAJ
anti-anti-sigma regulatory factor
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_1276_13
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12414..13010
DNA (597bp) protein (199aa)
rpoE; ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
rpoE; ECF subfamily RNA polymerase sigma-70 factor
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_1276_14
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

13016..14194
DNA (1179bp) protein (393aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
Displaying 14 items

View Taxonomy