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PLM3-1_170_b2_sep16_scaffold_1724

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1724_1
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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344..1657
DNA (1314bp) protein (438aa)
Proton/sodium-glutamate symport protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NF03_GLOVI
proton/sodium-glutamate symport protein
Proton/sodium-glutamate symport protein {ECO:0000313|EMBL:BAC91665.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM3-1_170_b2_sep16_scaffold_1724_2
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1666..3258)
DNA (1593bp) protein (531aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI000361931E
TPR repeat-containing protein {ECO:0000313|EMBL:EJF10060.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
TPR repeat-containing protein
PLM3-1_170_b2_sep16_scaffold_1724_3
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3278..4183)
DNA (906bp) protein (302aa)
Phosphate ABC transporter substrate-binding protein, PhoT family Tax=Pontibacter sp. BAB1700 RepID=J1FIA1_9BACT
phosphate ABC transporter substrate-binding protein, PhoT family
Phosphate ABC transporter substrate-binding protein, PhoT family {ECO:0000313|EMBL:AKD02516.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
PLM3-1_170_b2_sep16_scaffold_1724_4
unknown

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comp(4176..4424)
DNA (249bp) protein (83aa)
transmembrane_regions bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
PLM3-1_170_b2_sep16_scaffold_1724_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4524..5306)
DNA (783bp) protein (261aa)
TonB family protein; K03832 periplasmic protein TonB bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
TonB family protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_1724_6
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5325..5843)
DNA (519bp) protein (173aa)
Biopolymer transport protein ExbD/TolR Tax=Pontibacter sp. BAB1700 RepID=J0LEF0_9BACT bin=RAAC39 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ95951.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
PLM3-1_170_b2_sep16_scaffold_1724_7
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5847..6467)
DNA (621bp) protein (207aa)
Biopolymertransporter ExbD/TolR Tax=Pontibacter sp. BAB1700 RepID=J1FI96_9BACT bin=RAAC39 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria
Biopolymertransporter ExbD/TolR {ECO:0000313|EMBL:EJF10054.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
biopolymer transporter ExbD
PLM3-1_170_b2_sep16_scaffold_1724_8
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6501..7304)
DNA (804bp) protein (268aa)
hhy:Halhy_0330 MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
flagellar motor protein MotA
Flagellar motor protein MotA {ECO:0000313|EMBL:AIZ64986.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
PLM3-1_170_b2_sep16_scaffold_1724_9
Pelodictyon luteolum, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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7943..9430
DNA (1488bp) protein (496aa)
Amino acid/polyamine/organocation transporter, APC superfamily Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B3B3_PELLD
amino acid permease
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ABB24168.1}; Flags: Precursor;; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon luteolum (strain DSM 273) (Chlorobium luteolum (strain DSM; 273)).;"
PLM3-1_170_b2_sep16_scaffold_1724_10
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9545..10501
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KE62_CYAP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK71760.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC; 29155)).;"
PLM3-1_170_b2_sep16_scaffold_1724_11
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(10503..11363)
DNA (861bp) protein (287aa)
Restriction endonuclease Tax=Cyanothece sp. (strain PCC 8801) RepID=B7K2U8_CYAP8
restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:ACK67649.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 /; RF-1)).;"
PLM3-1_170_b2_sep16_scaffold_1724_12
unknown

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comp(11360..11446)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 12 items

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