ggKbase home page

PLM3-1_170_b2_sep16_scaffold_12616

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_12616_1
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1..2571)
DNA (2571bp) protein (857aa)
Heavy metal efflux pump, CzcA family bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
CzcA family heavy metal efflux pump
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
PLM3-1_170_b2_sep16_scaffold_12616_2
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2751..3170)
DNA (420bp) protein (140aa)
Tax=RBG_16_Ignavibacteria_35_7_curated
PLM3-1_170_b2_sep16_scaffold_12616_3
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(3445..4431)
DNA (987bp) protein (329aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002DCBCA2
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
PLM3-1_170_b2_sep16_scaffold_12616_4
RLO_PLX_64_10, Bacteria

Not on your lists

comp(4531..4839)
DNA (309bp) protein (103aa)
alias=16ft_combo_ws3_scaffold_11273_17 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_12616_5
RLO_PLX_64_10, Bacteria

Not on your lists

comp(4805..5215)
DNA (411bp) protein (137aa)
alias=16ft_combo_ws3_scaffold_11273_17 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_12616_6
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5433..7685)
DNA (2253bp) protein (751aa)
Putative membrane-associated oxidoreductase Tax=Marinobacter algicola DG893 RepID=A6EVY5_9ALTE
hypothetical protein
Tax=RBG_16_Ignavibacteria_35_7_curated
PLM3-1_170_b2_sep16_scaffold_12616_7
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8143..8904
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Melioribacter roseus P3M RepID=I6YWF6_MELRP bin=RAAC39 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_35_7_curated
Displaying 7 items

View Taxonomy