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PLM3-1_170_b2_sep16_scaffold_6483

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_6483_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(127..1302)
DNA (1176bp) protein (392aa)
Putative transmembrane protein Tax=uncultured crenarchaeote RepID=Q8NKM7_9CREN
putative esterase of the alpha-beta hydrolase superfamily
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:AIF85472.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_6483_2
unknown

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comp(1453..1692)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_6483_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1873..2370)
DNA (498bp) protein (166aa)
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIF83393.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_6483_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2966..3442)
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEI7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57178.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_6483_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3467..3655)
DNA (189bp) protein (63aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84297.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_6483_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3891..4766
DNA (876bp) protein (292aa)
Transcription initiation factor IIB Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILN8_NITGG
tfb2; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000313|EMBL:AFU57179.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_6483_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4788..5045
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICB6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57180.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_6483_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5076..5324)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7H2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57181.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_6483_9
unknown

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comp(6219..6359)
DNA (141bp) protein (47aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_6483_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6363..7337)
DNA (975bp) protein (325aa)
Putative Fe-S oxidoreductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II73_NITGG
putative Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:AIC16226.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_6483_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7736..9022)
DNA (1287bp) protein (429aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000313|EMBL:AFU57397.1}; EC=4.3.2.2 {ECO:0000313|EMBL:AFU57397.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Adenylosuccinate lyase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHS5_NITGG
PLM3-1_170_b2_sep16_scaffold_6483_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9154..10629
DNA (1476bp) protein (492aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
tRNA-splicing ligase RtcB Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF19_NITGG
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_6483_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10626..11090
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILW4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57399.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_6483_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11143..11556)
DNA (414bp) protein (138aa)
30S ribosomal protein S11 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILW6_NITGG
rps11p; 30S ribosomal protein S11p
R-protein S11p {ECO:0000313|EMBL:ADK26007.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3-1_170_b2_sep16_scaffold_6483_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11592..12530)
DNA (939bp) protein (313aa)
thiL; thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase {ECO:0000313|EMBL:AFU57405.1}; EC=2.7.4.16 {ECO:0000313|EMBL:AFU57405.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Thiamine-monophosphate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICP3_NITGG
PLM3-1_170_b2_sep16_scaffold_6483_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12514..13728)
DNA (1215bp) protein (405aa)
alpha-D-phosphohexomutase (EC:5.4.2.-)
Alpha-D-phosphohexomutase {ECO:0000313|EMBL:AFU57406.1}; EC=5.4.2.- {ECO:0000313|EMBL:AFU57406.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Alpha-D-phosphohexomutase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I807_NITGG
PLM3-1_170_b2_sep16_scaffold_6483_trna_1
unknown

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13900..13973
DNA (74bp)
transferRNA Thr
PLM3-1_170_b2_sep16_scaffold_6483_17
unknown

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comp(13966..14322)
DNA (357bp) protein (119aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_6483_18

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comp(14371..14580)
DNA (210bp) protein (70aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKM8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24888.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_6483_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14679..15704)
DNA (1026bp) protein (342aa)
adh2; NAD-dependent alcohol dehydrogenase (EC:1.1.1.1)
NAD-dependent alcohol dehydrogenase {ECO:0000313|EMBL:AFU57428.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AFU57428.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NAD-dependent alcohol dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF44_NITGG
Displaying 20 items

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