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PLM3-1_170_b2_sep16_scaffold_4810

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_4810_1
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1..258)
DNA (258bp) protein (86aa)
30S ribosomal protein S10 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILQ7_NITGG
SSU ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_4810_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(270..1583)
DNA (1314bp) protein (438aa)
Elongation factor 1-alpha Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICE8_NITGG
tuf; elongation factor 1-alpha
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_4810_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1747..2898
DNA (1152bp) protein (384aa)
fbp; bifunctional fructose-1,6-bisphosphatase (EC:3.1.3.11)
Bifunctional fructose-1,6-bisphosphatase {ECO:0000313|EMBL:AFU57241.1}; EC=3.1.3.11 {ECO:0000313|EMBL:AFU57241.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Bifunctional fructose-1,6-bisphosphatase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7L4_NITGG
PLM3-1_170_b2_sep16_scaffold_4810_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2895..3554
DNA (660bp) protein (220aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Triosephosphate isomerase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG7_NITGG
PLM3-1_170_b2_sep16_scaffold_4810_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3575..4198)
DNA (624bp) protein (208aa)
Putative UPF0126 membrane protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHR6_NITGG
hypothetical protein
Putative UPF0126 membrane protein {ECO:0000313|EMBL:AFU57377.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_4810_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4322..6916
DNA (2595bp) protein (865aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:AFU57376.1}; EC=2.7.9.1 {ECO:0000313|EMBL:AFU57376.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
ppdK; pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7Y1_NITGG
PLM3-1_170_b2_sep16_scaffold_4810_7
unknown

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7146..7613
DNA (468bp) protein (156aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_4810_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7966..8310
DNA (345bp) protein (115aa)
Putative nitrogen regulatory protein P-II Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHR2_NITGG
nitrogen regulatory protein P-II
Putative nitrogen regulatory protein P-II {ECO:0000313|EMBL:AFU57372.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_4810_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8315..8434)
DNA (120bp) protein (40aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84906.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Putative uncharacterized protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
Displaying 9 items

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