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PLM3-1_170_b2_sep16_scaffold_3618

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3618_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1..501
DNA (501bp) protein (167aa)
Transcription initiation factor IIB Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE10_NITGG
tfb3; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000313|EMBL:AFU58000.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3618_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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602..2041
DNA (1440bp) protein (480aa)
Cation diffusion facilitator family transporter Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE15_NITGG
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AFU58005.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3618_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2038..2409)
DNA (372bp) protein (124aa)
Putative signal transduction response regulator, receiver domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9I2_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU58006.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3618_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2671..3489
DNA (819bp) protein (273aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIS0_NITGG
yjeF-like protein, hydroxyethylthiazole kinase-related
PLM3-1_170_b2_sep16_scaffold_3618_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3513..4313
DNA (801bp) protein (267aa)
putative oxidoreductase, short chain dehydrogenase/reductase family (EC:1.1.1.-)
Uncharacterized protein {ECO:0000313|EMBL:AIF84683.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Short chain dehydrogenase/reductase family oxidoreductase bin=GWF2_Lentisphaerae_57_35 species=Legionella longbeachae genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
PLM3-1_170_b2_sep16_scaffold_3618_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4348..4695
DNA (348bp) protein (116aa)
Putative methionine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGP6_NITGG
methionine--tRNA ligase
Putative methionine--tRNA ligase {ECO:0000313|EMBL:AFU58008.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3618_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4758..5480)
DNA (723bp) protein (241aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMM3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58019.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3618_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5477..6358)
DNA (882bp) protein (294aa)
garR; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:AFU58020.1}; EC=1.1.1.60 {ECO:0000313|EMBL:AFU58020.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
2-hydroxy-3-oxopropionate reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE26_NITGG
PLM3-1_170_b2_sep16_scaffold_3618_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6493..7443
DNA (951bp) protein (317aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9M5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58021.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3618_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7742..8233
DNA (492bp) protein (164aa)
nudF2; NUDIX hydrolase (EC:3.6.1.13)
Putative NUDIX hydrolase {ECO:0000313|EMBL:AFU58023.1}; EC=3.6.1.13 {ECO:0000313|EMBL:AFU58023.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative NUDIX hydrolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGR0_NITGG
PLM3-1_170_b2_sep16_scaffold_3618_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8256..8621
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE29_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58025.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3618_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8714..10117
DNA (1404bp) protein (468aa)
FeS cluster assembly protein SufB Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9N0_NITGG
sufB; FeS cluster assembly protein SufB
Iron-regulated ABC transporter membrane component SufB {ECO:0000313|EMBL:AIF84692.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_3618_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10141..11298
DNA (1158bp) protein (386aa)
Putative FeS cluster assembly protein sufD Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIT6_NITGG
sufD; FeS cluster assembly protein sufD
Putative FeS cluster assembly protein sufD {ECO:0000313|EMBL:AFU58027.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying 13 items

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