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PLM3-1_170_b2_sep16_scaffold_2160

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2160_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2..637
DNA (636bp) protein (212aa)
30S ribosomal protein S3ae Tax=Candidatus Nitrososphaera gargensis RepID=K0IFZ8_NITGG
rps3ae; 30S ribosomal protein S3ae
R-protein S3ae {ECO:0000313|EMBL:ADK25997.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3-1_170_b2_sep16_scaffold_2160_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(713..1036)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJF0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59268.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2160_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1158..2063)
DNA (906bp) protein (302aa)
putative Ig domain-containing protein
Putative Ig domain-containing protein {ECO:0000313|EMBL:AIF84707.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
thrombospondin type 3 repeat protein, outer membrane domain-containing protein bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
PLM3-1_170_b2_sep16_scaffold_2160_4
unknown

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comp(2299..2583)
DNA (285bp) protein (95aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2160_5
unknown

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comp(2695..2967)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2160_6
unknown

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comp(3090..3413)
DNA (324bp) protein (108aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2160_7
unknown

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3451..3819
DNA (369bp) protein (123aa)
Putative uncharacterized protein C5_0057 Tax=uncultured archaeon RepID=Q2Y4U9_9ARCH
PLM3-1_170_b2_sep16_scaffold_2160_8
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(3881..4750)
DNA (870bp) protein (290aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000367033B
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:GAN31527.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
epimerase
PLM3-1_170_b2_sep16_scaffold_2160_9
R_OD1_Falkowbacteria_42_9, Falkowbacteria, Parcubacteria, Bacteria

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comp(4747..6060)
DNA (1314bp) protein (438aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003737867
radical SAM domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_42_9_curated
PLM3-1_170_b2_sep16_scaffold_2160_10
unknown

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6235..6699
DNA (465bp) protein (155aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2160_11

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comp(6763..7059)
DNA (297bp) protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN29816.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
# 28837 # 29049 # -1 # ;gc_cont=0.493 bin=Nanosalinarum tax=Nanosalinarum
PLM3-1_170_b2_sep16_scaffold_2160_12
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7318..7845
DNA (528bp) protein (176aa)
adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
Adenylyl-sulfate kinase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E981_METEZ
PLM3-1_170_b2_sep16_scaffold_2160_13

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8020..8283
DNA (264bp) protein (88aa)
Putative uncharacterized protein C5_0054 Tax=uncultured archaeon RepID=Q2Y4V2_9ARCH
Putative uncharacterized protein C5_0054 {ECO:0000313|EMBL:CAI64155.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
PLM3-1_170_b2_sep16_scaffold_2160_14
unknown

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8287..8688
DNA (402bp) protein (134aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2160_15
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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comp(8812..10227)
DNA (1416bp) protein (472aa)
type I phosphodiesterase/nucleotide pyrophosphatase bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Archaeoglobus veneficus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
PLM3-1_170_b2_sep16_scaffold_2160_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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10401..12293
DNA (1893bp) protein (631aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ATK5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05914.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
glucose/sorbosone dehydrogenase
PLM3-1_170_b2_sep16_scaffold_2160_17
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12352..13512)
DNA (1161bp) protein (387aa)
Glycosyl transferase family 2 Tax=Halobacterium sp. DL1 RepID=G4ICB0_9EURY
Glycosyl transferase family 2 {ECO:0000313|EMBL:AHG04077.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
glycosyl transferase family protein
PLM3-1_170_b2_sep16_scaffold_2160_18
uncultured marine crenarchaeote E6-3G, Crenarchaeota, Archaea

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comp(13509..13865)
DNA (357bp) protein (119aa)
UDP-glucose 4-epimerase Tax=uncultured marine crenarchaeote E6-3G RepID=G9BAK2_9CREN
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ADP09418.1}; species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" source="uncultured marine crenarchaeote E6-3G.;"
NAD-dependent epimerase/dehydratase
PLM3-1_170_b2_sep16_scaffold_2160_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13886..14332)
DNA (447bp) protein (149aa)
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:KCZ73368.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KCZ73368.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UDP-galactose-4-epimerase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UH5_METBU
NAD-dependent epimerase/dehydratase
PLM3-1_170_b2_sep16_scaffold_2160_20
unknown

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comp(14386..16032)
DNA (1647bp) protein (549aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2160_21
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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comp(16054..17637)
DNA (1584bp) protein (528aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9T9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EMR73628.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
type I phosphodiesterase/nucleotide pyrophosphatase
PLM3-1_170_b2_sep16_scaffold_2160_22
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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comp(17697..19253)
DNA (1557bp) protein (519aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9T9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EMR73628.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
type I phosphodiesterase/nucleotide pyrophosphatase
PLM3-1_170_b2_sep16_scaffold_2160_23
unknown

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comp(19289..19663)
DNA (375bp) protein (125aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2160_24
uncultured Candidatus Nitrosocaldus sp., Candidatus Nitrosocaldus, Crenarchaeota, Archaea

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comp(19791..21263)
DNA (1473bp) protein (491aa)
Hypothetical conserved protein Tax=Crenarchaeota RepID=H5SVV2_9CREN
Putative uncharacterized protein HGIII-02 {ECO:0000313|EMBL:BAE03227.1}; species="Archaea; Crenarchaeota; Candidatus Nitrosocaldus; environmental samples.;" source="uncultured Candidatus Nitrosocaldus sp.;"
PLM3-1_170_b2_sep16_scaffold_2160_25
Methanosphaera stadtmanae, Methanosphaera, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(21256..22761)
DNA (1506bp) protein (502aa)
Predicted O-antigen and teichoic acid export protein Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NFU7_METST
O-antigen and teichoic acid export protein
Predicted O-antigen and teichoic acid export protein {ECO:0000313|EMBL:ABC57306.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanosphaera.;" source="Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 /; MCB-3).;"
PLM3-1_170_b2_sep16_scaffold_2160_26
Thermogladius cellulolyticus, Thermogladius, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(22804..23460)
DNA (657bp) protein (219aa)
Membrane protein Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TDM3_THEC1
membrane protein
Membrane protein {ECO:0000313|EMBL:AFK50861.1}; species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Thermogladius.;" source="Thermogladius cellulolyticus (strain 1633).;"
PLM3-1_170_b2_sep16_scaffold_2160_27
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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comp(23430..24032)
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T7R2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EMR72943.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
PLM3-1_170_b2_sep16_scaffold_2160_28
unknown

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comp(24075..24563)
DNA (489bp) protein (163aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2160_29
unknown

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comp(24575..24784)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2160_30
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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comp(24781..25695)
DNA (915bp) protein (305aa)
Uncharacterized protein (Fragment) Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9V5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EMR73658.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
Displaying items 1-30 of 35 in total

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