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PLM3-1_170_b2_sep16_scaffold_2415

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2415_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3..722)
DNA (720bp) protein (240aa)
lig; DNA ligase (EC:6.5.1.1)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICR2_NITGG
PLM3-1_170_b2_sep16_scaffold_2415_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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801..1127
DNA (327bp) protein (109aa)
30S ribosomal protein S25e Tax=Candidatus Nitrososphaera gargensis RepID=K0IKT6_NITGG
rps25e; 30S ribosomal protein S25
30S ribosomal protein S25e {ECO:0000313|EMBL:AFU59157.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2415_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1117..1416)
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ80_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59158.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2415_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1923..2231
DNA (309bp) protein (103aa)
DNA-directed RNA polymerase subunit K Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND0_NITGG
rpoK; DNA-directed RNA polymerase subunit K
DNA-directed RNA polymerase subunit K {ECO:0000313|EMBL:AFU59159.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2415_5
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2242..3066)
DNA (825bp) protein (275aa)
Putative transcriptional regulator, ArsR family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH22_NITGG
putative transcriptional regulator, ArsR family
Putative transcriptional regulator, ArsR family {ECO:0000313|EMBL:AIC15069.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_2415_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3111..3344)
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICR8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59161.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2415_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3383..3784)
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKT9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59162.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2415_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4008..5033
DNA (1026bp) protein (342aa)
Putative alcohol dehydrogenase zinc-binding domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ85_NITGG
alcohol dehydrogenase zinc-binding domain-containing protein
Putative alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:AFU59163.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2415_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5074..5925
DNA (852bp) protein (284aa)
lsrF; putative aldolase LsrF (EC:4.1.2.-)
Putative aldolase LsrF {ECO:0000313|EMBL:AIC15074.1}; EC=4.1.2.- {ECO:0000313|EMBL:AIC15074.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Putative aldolase LsrF Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKU9_NITGG
PLM3-1_170_b2_sep16_scaffold_2415_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5922..6338)
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ97_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15075.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_2415_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6525..8213
DNA (1689bp) protein (563aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
ilvB; acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH36_NITGG
PLM3-1_170_b2_sep16_scaffold_2415_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8217..8729
DNA (513bp) protein (171aa)
ilvH; acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:AIC15077.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AIC15077.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Acetolactate synthase, small subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICU6_NITGG
PLM3-1_170_b2_sep16_scaffold_2415_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8816..9685
DNA (870bp) protein (290aa)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13 2.3.1.182)
2-isopropylmalate synthase {ECO:0000313|EMBL:AFU59172.1}; EC=2.3.1.182 {ECO:0000313|EMBL:AFU59172.1};; EC=2.3.3.13 {ECO:0000313|EMBL:AFU59172.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
2-isopropylmalate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKV7_NITGG
Displaying 13 items

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