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PLM3-1_170_b2_sep16_scaffold_2615

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2615_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1..252)
DNA (252bp) protein (84aa)
Zn-dependent hydrolase of the beta-lactamase fold protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHY2_NITGG
Zn-dependent hydrolase
Zn-dependent hydrolase of the beta-lactamase fold protein {ECO:0000313|EMBL:AFU57527.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2615_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(278..685)
DNA (408bp) protein (136aa)
hypothetical protein Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00035E2C66
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16799.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_2615_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(687..1949)
DNA (1263bp) protein (421aa)
Translation initiation factor 2, subunit gamma Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICY3_NITGG
eif2g; translation initiation factor 2, subunit gamma
Translation initiation factor 2, subunit gamma {ECO:0000313|EMBL:AFU57525.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2615_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2000..2413)
DNA (414bp) protein (138aa)
30S ribosomal protein S6e (Fragment) Tax=Candidatus Nitrososphaera gargensis RepID=E0A1E5_9ARCH
30S ribosomal protein S6e {ECO:0000256|SAAS:SAAS00018829}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
rps6e; 30S ribosomal protein S6e
PLM3-1_170_b2_sep16_scaffold_2615_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2627..2830)
DNA (204bp) protein (68aa)
Putative zinc-domain protein Tax=Candidatus Nitrososphaera gargensis RepID=K0IFB6_NITGG
zinc-domain-containing protein
Zinc-domain protein {ECO:0000313|EMBL:ADK25964.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3-1_170_b2_sep16_scaffold_2615_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2865..3377
DNA (513bp) protein (171aa)
dusP; dual specificity protein phosphatase (EC:3.1.3.16)
Dual specificity protein phosphatase {ECO:0000313|EMBL:AFU57522.1}; EC=3.1.3.16 {ECO:0000313|EMBL:AFU57522.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Dual specificity protein phosphatase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHX9_NITGG
PLM3-1_170_b2_sep16_scaffold_2615_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3466..3612)
DNA (147bp) protein (49aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8C0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16811.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_2615_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3659..3994)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICX9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57520.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2615_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4096..6735)
DNA (2640bp) protein (880aa)
ileS; isoleucine--tRNA ligase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000313|EMBL:AFU57519.1}; EC=6.1.1.5 {ECO:0000313|EMBL:AFU57519.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Isoleucine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM26_NITGG
PLM3-1_170_b2_sep16_scaffold_2615_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6777..7208)
DNA (432bp) protein (144aa)
ileS; isoleucine--tRNA ligase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000313|EMBL:AFU57519.1}; EC=6.1.1.5 {ECO:0000313|EMBL:AFU57519.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Isoleucine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM26_NITGG
PLM3-1_170_b2_sep16_scaffold_2615_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7324..7857
DNA (534bp) protein (178aa)
inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Inorganic pyrophosphatase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICW7_NITGG
PLM3-1_170_b2_sep16_scaffold_2615_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7858..9006)
DNA (1149bp) protein (383aa)
AAA-type ATPase domain-containing putative archaeal cell division protein Vps4 Tax=Candidatus Nitrososphaera gargensis RepID=K0IM19_NITGG
AAA-type ATPase domain-containing putative archaeal cell division protein Vps4
AAA-type ATPase domain-containing putative archaeal cell division protein Vps4 {ECO:0000313|EMBL:AFU57509.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2615_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9182..9574)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57508.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2615_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9851..10501)
DNA (651bp) protein (217aa)
SNF7-domain-containing protein Tax=Candidatus Nitrososphaera gargensis RepID=K0IHX6_NITGG
SNF7-domain-containing protein
SNF7-domain-containing protein {ECO:0000313|EMBL:AFU57507.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2615_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10645..11841
DNA (1197bp) protein (399aa)
Transcriptional regulator, TrmB Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8A8_NITGG
transcriptional regulator TrmB
Transcriptional regulator, TrmB {ECO:0000313|EMBL:AFU57506.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2615_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11875..12408
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57503.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2615_17
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(12546..13544)
DNA (999bp) protein (333aa)
Diphosphomevalonate decarboxylase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5R2_CALAS
mvaD; diphosphomevalonate decarboxylase
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:BAM00600.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3-1_170_b2_sep16_scaffold_2615_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13602..14414)
DNA (813bp) protein (271aa)
Putative tRNA methyltransferase complex GCD14 subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8A3_NITGG
tRNA methyltransferase complex GCD14 subunit
Putative tRNA methyltransferase complex GCD14 subunit {ECO:0000313|EMBL:AFU57501.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2615_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14559..15923)
DNA (1365bp) protein (455aa)
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Arginine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM12_NITGG
PLM3-1_170_b2_sep16_scaffold_2615_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15923..16342)
DNA (420bp) protein (140aa)
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Arginine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM12_NITGG
PLM3-1_170_b2_sep16_scaffold_2615_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16339..17046)
DNA (708bp) protein (236aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01419};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoglycolate phosphatase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF98_NITGG
PLM3-1_170_b2_sep16_scaffold_2615_22
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17150..18109)
DNA (960bp) protein (320aa)
Putative CorA-like transport protein Tax=uncultured crenarchaeote RepID=Q702F2_9CREN
Mg2+/Co2+ transporter
Mg2+/Co2+ transporter {ECO:0000313|EMBL:AIF83398.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_2615_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18255..18785)
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHX0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57497.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2615_24
unknown

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comp(19371..19535)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 24 items

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