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PLM3-1_170_b2_sep16_scaffold_384

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_384_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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216..644
DNA (429bp) protein (143aa)
Putative chaperone protein DnaJ Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN14_NITGG
dnaJ1; chaperone protein DnaJ
Putative chaperone protein DnaJ {ECO:0000313|EMBL:AFU58579.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_384_2
unknown

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756..908
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_384_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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948..1244
DNA (297bp) protein (99aa)
atpF; archaeal A1A0-type ATP synthase, subunit F (EC:3.6.3.14)
Archaeal A1A0-type ATP synthase, subunit F {ECO:0000313|EMBL:AFU58580.1}; EC=3.6.3.14 {ECO:0000313|EMBL:AFU58580.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Archaeal A1A0-type ATP synthase, subunit F Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFJ1_NITGG
PLM3-1_170_b2_sep16_scaffold_384_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1241..1720)
DNA (480bp) protein (160aa)
Putative class II aldolase/adducin family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB92_NITGG
class II aldolase/adducin family protein
Putative class II aldolase/adducin family protein {ECO:0000313|EMBL:AFU58581.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_384_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2097..3455
DNA (1359bp) protein (453aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJY2_NITGG
quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AFU58582.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_384_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3513..4094
DNA (582bp) protein (194aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AIC14756.1}; EC=2.7.8.5 {ECO:0000313|EMBL:AIC14756.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFJ6_NITGG
PLM3-1_170_b2_sep16_scaffold_384_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3902..4327)
DNA (426bp) protein (142aa)
30S ribosomal protein S26e Tax=Candidatus Nitrososphaera gargensis RepID=K0IB98_NITGG
SSU ribosomal protein S26E
30S ribosomal protein S26e {ECO:0000313|EMBL:AIC14755.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_384_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4970..5824
DNA (855bp) protein (285aa)
PfkB family carbohydrate kinase (EC:2.7.1.-)
PfkB family carbohydrate kinase {ECO:0000313|EMBL:AFU58588.1}; EC=2.7.1.- {ECO:0000313|EMBL:AFU58588.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PfkB family carbohydrate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II25_NITGG
PLM3-1_170_b2_sep16_scaffold_384_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5854..6519
DNA (666bp) protein (222aa)
putative sugar kinase (EC:2.7.1.23)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Putative inorganic polyphosphate/ATP-NAD kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN16_NITGG
PLM3-1_170_b2_sep16_scaffold_384_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6599..8167)
DNA (1569bp) protein (523aa)
pyrG; CTP synthase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
CTP synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFK2_NITGG
PLM3-1_170_b2_sep16_scaffold_384_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8321..8707
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBA6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58591.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_384_12
unknown

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comp(8739..9032)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_384_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9178..9444)
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II29_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58593.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_384_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9461..10621)
DNA (1161bp) protein (387aa)
ORC1-type DNA replication protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN17_NITGG
cdc6; cell division control protein 6-like protein
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_384_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10812..11657
DNA (846bp) protein (282aa)
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol-phosphate synthase {ECO:0000313|EMBL:AFU58595.1}; EC=4.1.1.48 {ECO:0000313|EMBL:AFU58595.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Indole-3-glycerol-phosphate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFK7_NITGG
PLM3-1_170_b2_sep16_scaffold_384_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11706..12929
DNA (1224bp) protein (408aa)
trpB; tryptophan synthase subunit beta (EC:4.1.2.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Tryptophan synthase beta chain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBB0_NITGG
PLM3-1_170_b2_sep16_scaffold_384_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12913..13734
DNA (822bp) protein (274aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Tryptophan synthase alpha chain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJZ2_NITGG
PLM3-1_170_b2_sep16_scaffold_384_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14005..14277
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN18_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58599.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_384_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14305..14628)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFL1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58600.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_384_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14656..15561)
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBC3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58601.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_384_21
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15864..16118
DNA (255bp) protein (85aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14741.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Uncharacterized protein bin=GWD2_CPR2_39_7 species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
PLM3-1_170_b2_sep16_scaffold_384_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16255..17280
DNA (1026bp) protein (342aa)
DNA repair and recombination protein RadA Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJZ6_NITGG
radA1; DNA repair and recombination protein
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_384_23
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17288..18358)
DNA (1071bp) protein (357aa)
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Anthranilate phosphoribosyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II35_NITGG
PLM3-1_170_b2_sep16_scaffold_384_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18355..18942)
DNA (588bp) protein (196aa)
trpG; anthranilate synthase component II (EC:4.1.3.27)
Anthranilate synthase component II {ECO:0000313|EMBL:AFU58604.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AFU58604.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Anthranilate synthase component II Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN19_NITGG
PLM3-1_170_b2_sep16_scaffold_384_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19174..20208
DNA (1035bp) protein (345aa)
gap; glyceraldehyde-3-phosphate dehydrogenase, phosphorylating (EC:1.2.1.59)
Putative glyceraldehyde-3-phosphate dehydrogenase, phosphorylating {ECO:0000313|EMBL:AFU58605.1}; EC=1.2.1.59 {ECO:0000313|EMBL:AFU58605.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative glyceraldehyde-3-phosphate dehydrogenase, phosphorylating Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFL6_NITGG
PLM3-1_170_b2_sep16_scaffold_384_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(20201..20776)
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFM7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58615.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_384_27
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20828..21136)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Vibrio nigripulchritudo RepID=F9TI59_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:ELU50132.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii CAIM 519 = NBRC 15631.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_384_28
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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21232..21375
DNA (144bp) protein (48aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14734.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_384_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21413..21967)
DNA (555bp) protein (185aa)
Putative transcriptional regulator, XRE family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN22_NITGG
XRE family transcriptional regulator
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:AFU58619.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_384_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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22089..23369
DNA (1281bp) protein (427aa)
Peptide chain release factor subunit 1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK10_NITGG
prf1; peptide chain release factor subunit 1
Peptide chain release factor subunit 1 {ECO:0000313|EMBL:AFU58622.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 35 in total

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