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PLM3-1_170_b2_sep16_scaffold_650

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_650_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1..396
DNA (396bp) protein (132aa)
Putative pyridine nucleotide-disulfide oxidoreductase family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIV4_NITGG
putative esterase of the alpha-beta hydrolase superfamily
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:AIF85472.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_650_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(927..1445)
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDM5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57790.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_650_3
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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1588..1968
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IID6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGP93096.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
PLM3-1_170_b2_sep16_scaffold_650_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1962..2504
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I920_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57791.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_650_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2824..3039
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH69_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82446.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_650_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(3252..3596)
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFT1_NITGG
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AIF85570.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_650_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3597..3785)
DNA (189bp) protein (63aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16268.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_650_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4820..5275)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKZ1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59222.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_650_9
unknown

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5747..6004
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_650_10
unknown

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6162..6359
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_650_11
unknown

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6492..6704
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_650_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6823..7788
DNA (966bp) protein (322aa)
GCN5 family acetyltransferase Tax=Rhodococcus opacus RepID=UPI00029CBDDD
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AIC15853.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_650_trna_1
unknown

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comp(7818..7911)
DNA (94bp)
transferRNA Met
PLM3-1_170_b2_sep16_scaffold_650_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8053..8679
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICZ1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59236.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_650_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8703..10220)
DNA (1518bp) protein (506aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF14_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57393.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_650_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10282..11862)
DNA (1581bp) protein (527aa)
top1; DNA topoisomerase IB (EC:5.99.1.2)
DNA topoisomerase IB {ECO:0000313|EMBL:AFU57392.1}; EC=5.99.1.2 {ECO:0000313|EMBL:AFU57392.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA topoisomerase IB Tax=Candidatus Nitrososphaera gargensis RepID=K0IHS2_NITGG
PLM3-1_170_b2_sep16_scaffold_650_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12015..14585)
DNA (2571bp) protein (857aa)
DEAD/DEAH box helicase domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICN1_NITGG
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:AFU57390.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DEAD/DEAH box helicase
PLM3-1_170_b2_sep16_scaffold_650_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14844..15404
DNA (561bp) protein (187aa)
Putative ubiquinone/menaquinone biosynthesis methyltransferase UbiE Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHS1_NITGG
ubiE1; ubiquinone/menaquinone biosynthesis methyltransferase UbiE
Putative ubiquinone/menaquinone biosynthesis methyltransferase UbiE {ECO:0000313|EMBL:AFU57387.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_650_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15411..16556
DNA (1146bp) protein (382aa)
Major facilitator superfamily MFS_1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7Y8_NITGG
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AFU57386.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_650_19
unknown

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16590..16763
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_650_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16723..17412)
DNA (690bp) protein (230aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:AFU57385.1}; EC=2.1.2.2 {ECO:0000313|EMBL:AFU57385.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoribosylglycinamide formyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICM7_NITGG
PLM3-1_170_b2_sep16_scaffold_650_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17457..18512
DNA (1056bp) protein (352aa)
Putative exonuclease of the beta-lactamase fold protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICM5_NITGG
exonuclease of the beta-lactamase fold protein
Putative exonuclease of the beta-lactamase fold protein {ECO:0000313|EMBL:AFU57380.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_650_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18543..19451)
DNA (909bp) protein (303aa)
Luciferase-like monooxygenase family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7N2_NITGG
luciferase-like monooxygenase family protein
Luciferase-like monooxygenase family protein {ECO:0000313|EMBL:AFU57256.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_650_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19652..19900
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEU7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57318.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_650_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19887..21110)
DNA (1224bp) protein (408aa)
ytsJ; NAD(P)-dependent malic enzyme (EC:1.1.1.40)
NAD(P)-dependent malic enzyme {ECO:0000313|EMBL:AFU57319.1}; EC=1.1.1.40 {ECO:0000313|EMBL:AFU57319.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NAD(P)-dependent malic enzyme Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILT4_NITGG
PLM3-1_170_b2_sep16_scaffold_650_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(21149..22357)
DNA (1209bp) protein (403aa)
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Citrate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICJ4_NITGG
PLM3-1_170_b2_sep16_scaffold_650_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

22596..23603
DNA (1008bp) protein (336aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoribosylformylglycinamidine cyclo-ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7S9_NITGG
PLM3-1_170_b2_sep16_scaffold_650_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

23783..25222
DNA (1440bp) protein (480aa)
histone acetyltransferase (EC:2.3.1.48)
Histone acetyltransferase, ELP3 family {ECO:0000313|EMBL:AFU57322.1}; EC=2.3.1.48 {ECO:0000313|EMBL:AFU57322.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Histone acetyltransferase, ELP3 family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHN1_NITGG
PLM3-1_170_b2_sep16_scaffold_650_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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25223..26761
DNA (1539bp) protein (513aa)
lysS; lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Lysine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEV0_NITGG
PLM3-1_170_b2_sep16_scaffold_650_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

26834..27217
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEX1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57343.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 33 in total

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