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PLM3-1_170_b2_sep16_scaffold_815

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_815_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3..419)
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I6U7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU56976.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_2
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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694..3183
DNA (2490bp) protein (830aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035D2938
WD-40-like beta propeller repeat-containing protein
Tax=RBG_13_Chloroflexi_56_8_curated
PLM3-1_170_b2_sep16_scaffold_815_3
unknown

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3280..3795
DNA (516bp) protein (172aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_815_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3839..4000
DNA (162bp) protein (54aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIV8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58057.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(4066..7902)
DNA (3837bp) protein (1279aa)
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:CDI04934.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CDI04934.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Ribonucleoside-diphosphate reductase Tax=Thaumarchaeota archaeon N4 RepID=V6AQS8_9ARCH
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
PLM3-1_170_b2_sep16_scaffold_815_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8138..10264)
DNA (2127bp) protein (709aa)
Putative anaerobic ribonucleoside-triphosphate reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILA7_NITGG
Putative anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:AFU56974.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
anaerobic ribonucleoside-triphosphate reductase
PLM3-1_170_b2_sep16_scaffold_815_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10373..10984)
DNA (612bp) protein (204aa)
SNF7 domain-containing protein Tax=Candidatus Nitrososphaera gargensis RepID=K0IDT2_NITGG
snf7; SNF7 domain-containing protein
SNF7 domain-containing protein {ECO:0000313|EMBL:AFU56973.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11120..11734
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGN7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU56972.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12228..12623)
DNA (396bp) protein (132aa)
Putative nucleic-acid-binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILA3_NITGG
nucleic-acid-binding protein
Putative nucleic-acid-binding protein {ECO:0000313|EMBL:AFU56969.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12630..13796)
DNA (1167bp) protein (389aa)
acetoacetyl-CoA thiolase (EC:2.3.1.9 2.3.1.16)
Acetoacetyl-CoA thiolase {ECO:0000313|EMBL:AFU56968.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AFU56968.1};; EC=2.3.1.9 {ECO:0000313|EMBL:AFU56968.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Acetoacetyl-CoA thiolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDS8_NITGG
PLM3-1_170_b2_sep16_scaffold_815_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13954..16011
DNA (2058bp) protein (686aa)
topA; DNA topoisomerase IA (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA topoisomerase 1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBM4_NITGG
PLM3-1_170_b2_sep16_scaffold_815_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16211..17002)
DNA (792bp) protein (264aa)
Putative carbon-nitrogen hydrolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILA0_NITGG
carbon-nitrogen hydrolase
Putative carbon-nitrogen hydrolase {ECO:0000313|EMBL:AFU56964.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17052..17228)
DNA (177bp) protein (59aa)
Putative 4-oxalocrotonate tautomerase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGM8_NITGG
4-oxalocrotonate tautomerase
Putative 4-oxalocrotonate tautomerase {ECO:0000313|EMBL:AFU56962.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_14
unknown

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comp(18317..18799)
DNA (483bp) protein (161aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_815_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18846..19361)
DNA (516bp) protein (172aa)
Transcription factor E Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDR9_NITGG
tfe; transcription factor E
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Transcription initiation factor TFIIE {ECO:0000256|HAMAP-Rule:MF_01909}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(19405..20355)
DNA (951bp) protein (317aa)
Putative adenylate cyclase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGM3_NITGG
adenylate cyclase
Putative adenylate cyclase {ECO:0000313|EMBL:AFU56957.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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20484..20666
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I6S2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU56956.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(20650..21039)
DNA (390bp) protein (130aa)
Putative signal transduction response regulator, receiver domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBL5_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU56955.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21194..21706)
DNA (513bp) protein (171aa)
Heme-containing membrane protein CtaA Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL86_NITGG
ctaA; heme-containing membrane protein CtaA
Heme-containing membrane protein CtaA {ECO:0000313|EMBL:AFU56954.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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22183..23598
DNA (1416bp) protein (472aa)
polB1; DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase D small subunit (Fragment) Tax=Candidatus Nitrososphaera gargensis RepID=D9ZB68_9ARCH
DNA polymerase D small subunit {ECO:0000313|EMBL:ADK25965.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3-1_170_b2_sep16_scaffold_815_21
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(23582..24799)
DNA (1218bp) protein (406aa)
ORC1-type DNA replication protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I6R5_NITGG
cdc6-3; cell division control protein 6
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_815_22
unknown

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25109..25306
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_815_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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25339..25794
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP51_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60514.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(25727..26389)
DNA (663bp) protein (221aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILM6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60513.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(26441..26812)
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMR5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60512.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_815_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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26888..27433
DNA (546bp) protein (182aa)
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:0000256|HAMAP-Rule:MF_00112};; (S)-3-O-geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Phosphoglycerol geranylgeranyltransferase {ECO:0000256|HAMAP-Rule:MF_00112}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Geranylgeranylglyceryl phosphate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGJ8_NITGG
PLM3-1_170_b2_sep16_scaffold_815_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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27405..27593
DNA (189bp) protein (63aa)
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:0000256|HAMAP-Rule:MF_00112};; (S)-3-O-geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Phosphoglycerol geranylgeranyltransferase {ECO:0000256|HAMAP-Rule:MF_00112}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Geranylgeranylglyceryl phosphate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGJ8_NITGG
PLM3-1_170_b2_sep16_scaffold_815_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

27597..27908
DNA (312bp) protein (104aa)
polC; DNA polymerase II large subunit (EC:2.7.7.7)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA polymerase II large subunit Tax=Candidatus Nitrososphaera gargensis RepID=K0IK45_NITGG
PLM3-1_170_b2_sep16_scaffold_815_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

27890..30928
DNA (3039bp) protein (1013aa)
polC; DNA polymerase II large subunit (EC:2.7.7.7)
DNA polymerase II large subunit Tax=Candidatus Nitrososphaera gargensis RepID=K0IK45_NITGG
DNA polymerase D large subunit {ECO:0000313|EMBL:ADK25966.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3-1_170_b2_sep16_scaffold_815_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(30925..32259)
DNA (1335bp) protein (445aa)
Putative molybdopterin biosynthesis protein MoeB Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP50_NITGG
molybdopterin biosynthesis protein MoeB
Putative molybdopterin biosynthesis protein MoeB {ECO:0000313|EMBL:AFU60509.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 43 in total

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