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PLM3-1_170_b2_sep16_scaffold_825

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_825_1
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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1..1284
DNA (1284bp) protein (428aa)
Gll3431 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFU3_GLOVI
sulfatase
Gll3431 protein {ECO:0000313|EMBL:BAC91372.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM3-1_170_b2_sep16_scaffold_825_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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1612..3090
DNA (1479bp) protein (493aa)
Chitinase protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TYJ7_9DELT
peptidase, m36 (fungalysin) family
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b2_sep16_scaffold_825_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3138..4655)
DNA (1518bp) protein (506aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15927.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_825_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4995..5813)
DNA (819bp) protein (273aa)
PHP domain protein Tax=Thaumarchaeota archaeon N4 RepID=V6AS60_9ARCH
putative metal-dependent phosphoesterase, PHP family
Putative metal-dependent phosphoesterase, PHP family {ECO:0000313|EMBL:AIF82918.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_825_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6090..6341)
DNA (252bp) protein (84aa)
TRAM domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBW5_NITGG
putative RNA-binding protein, contains TRAM domain
Putative RNA-binding protein, contains TRAM domain {ECO:0000313|EMBL:AIF83749.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_825_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6360..6701)
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILB7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82916.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_825_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6900..7334)
DNA (435bp) protein (145aa)
Translation initiation factor 1A Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGQ1_NITGG
eIF-1a1; Translation initiation factor 1A (IF-1)
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_825_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8123..8383
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF07_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59941.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_825_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8380..8679
DNA (300bp) protein (100aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF85160.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_825_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8672..8911)
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INT6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16687.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_825_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9103..9324
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKS0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59938.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_825_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9325..10356)
DNA (1032bp) protein (344aa)
pfkB family carbohydrate kinase (EC:2.7.1.-)
PfkB family carbohydrate kinase {ECO:0000313|EMBL:AFU59937.1}; EC=2.7.1.- {ECO:0000313|EMBL:AFU59937.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PfkB family carbohydrate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM29_NITGG
PLM3-1_170_b2_sep16_scaffold_825_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10428..12095)
DNA (1668bp) protein (556aa)
Archaeal thermosome Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDZ4_NITGG
ths; archaeal thermosome
Archaeal thermosome {ECO:0000313|EMBL:AFU57043.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_825_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12159..12575)
DNA (417bp) protein (139aa)
Putative thioesterase superfamily protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGU9_NITGG
thioesterase superfamily protein
Putative thioesterase superfamily protein {ECO:0000313|EMBL:AFU57042.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_825_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12600..12815)
DNA (216bp) protein (72aa)
Zinc finger C2H2 domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I6Z9_NITGG
zinc finger C2H2 domain-containing protein
Zinc finger C2H2 domain-containing protein {ECO:0000313|EMBL:AFU57041.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_825_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13127..13399
DNA (273bp) protein (91aa)
50S ribosomal protein L44e Tax=Candidatus Nitrososphaera gargensis RepID=K0ILF6_NITGG
rpl44e; 50S ribosomal protein L44e
R-protein L44e {ECO:0000313|EMBL:ADK26051.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3-1_170_b2_sep16_scaffold_825_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13399..13596
DNA (198bp) protein (66aa)
30S ribosomal protein S27e Tax=Candidatus Nitrososphaera gargensis RepID=K0IBX3_NITGG
rps27e; 30S ribosomal protein S27e
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_825_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13576..14160)
DNA (585bp) protein (195aa)
Putative nucleotidyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I710_NITGG
nucleotidyltransferase
Putative nucleotidyltransferase {ECO:0000313|EMBL:AFU57051.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_825_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14172..14921)
DNA (750bp) protein (250aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Cobalamin synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGW4_NITGG
cobS; cobalamin synthase
PLM3-1_170_b2_sep16_scaffold_825_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14908..15876)
DNA (969bp) protein (323aa)
cobD; cobalamin biosynthesis protein CobD (EC:6.3.1.10)
Probable cobalamin biosynthesis protein CobD Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE05_NITGG
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_825_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15873..16268)
DNA (396bp) protein (132aa)
cobQ; cobyric acid synthase (EC:6.3.5.10)
Probable cobyric acid synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILF9_NITGG
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_825_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16325..16657)
DNA (333bp) protein (111aa)
cobQ; cobyric acid synthase (EC:6.3.5.10)
Probable cobyric acid synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILF9_NITGG
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_825_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16650..17798)
DNA (1149bp) protein (383aa)
Putative aminotransferase class I and II Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBX8_NITGG
aminotransferase class I and II
Putative aminotransferase class I and II {ECO:0000313|EMBL:AFU57055.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_825_24
unknown

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comp(17788..17892)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 24 items

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