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PLM3-1_170_b2_sep16_scaffold_948

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_948_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2..223
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKN5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59062.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_948_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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246..728
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIZ2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59063.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_948_trna_1
unknown

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comp(735..808)
DNA (74bp)
transferRNA Ala
PLM3-1_170_b2_sep16_scaffold_948_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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900..1322
DNA (423bp) protein (141aa)
Putative NUDIX hydrolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGU3_NITGG
NUDIX hydrolase
Putative NUDIX hydrolase {ECO:0000313|EMBL:AFU59065.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_948_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1386..2969
DNA (1584bp) protein (528aa)
Putative radical SAM domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKN7_NITGG
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:AIF84330.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_948_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2976..3305)
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIZ5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59068.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_948_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3352..4194)
DNA (843bp) protein (281aa)
Putative oxidoreductase FAD/NAD(P)-binding subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INB2_NITGG
oxidoreductase FAD/NAD(P)-binding subunit
Putative oxidoreductase FAD/NAD(P)-binding subunit {ECO:0000313|EMBL:AFU59069.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_948_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4428..4718
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGV8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59085.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_948_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4715..5206)
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICI2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59086.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_948_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5259..6128)
DNA (870bp) protein (290aa)
fumarylacetoacetate hydrolase (EC:3.-.-.-)
Putative fumarylacetoacetate hydrolase {ECO:0000313|EMBL:AFU59087.1}; EC=3.-.-.- {ECO:0000313|EMBL:AFU59087.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative fumarylacetoacetate hydrolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKP8_NITGG
PLM3-1_170_b2_sep16_scaffold_948_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6136..7875)
DNA (1740bp) protein (580aa)
gltX; glutamate--tRNA ligase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|SAAS:SAAS00088701}; EC=6.1.1.17 {ECO:0000256|SAAS:SAAS00088701};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Glutamate--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ10_NITGG
PLM3-1_170_b2_sep16_scaffold_948_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7881..8891)
DNA (1011bp) protein (337aa)
gds2; geranylgeranyl pyrophosphate synthase (EC:2.5.1.1 2.5.1.10)
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:AFU59089.1}; EC=2.5.1.1 {ECO:0000313|EMBL:AFU59089.1};; EC=2.5.1.10 {ECO:0000313|EMBL:AFU59089.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Geranylgeranyl pyrophosphate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INB6_NITGG
PLM3-1_170_b2_sep16_scaffold_948_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8888..9982)
DNA (1095bp) protein (365aa)
fni; isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Isopentenyl-diphosphate delta-isomerase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGW0_NITGG
PLM3-1_170_b2_sep16_scaffold_948_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9983..10723)
DNA (741bp) protein (247aa)
Putative aspartate/glutamate/uridylate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICI6_NITGG
aspartate/glutamate/uridylate kinase
Putative aspartate/glutamate/uridylate kinase {ECO:0000313|EMBL:AFU59091.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_948_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10893..11207)
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ14_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59093.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_948_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11304..12425
DNA (1122bp) protein (374aa)
TPR repeat protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INB7_NITGG
hypothetical protein
TPR repeat protein {ECO:0000313|EMBL:AFU59094.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_948_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12453..13481
DNA (1029bp) protein (343aa)
Putative myo-inositol-1-phosphate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGW3_NITGG
myo-inositol-1-phosphate synthase
Putative myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:AFU59095.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_948_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13522..14334
DNA (813bp) protein (271aa)
Putative ribose 1,5-bisphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00304}; EC=5.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00304};; Ribulose 1,5-bisphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00304}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative thiazole biosynthetic enzyme Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICK5_NITGG
thiazole biosynthetic enzyme
PLM3-1_170_b2_sep16_scaffold_948_18
unknown

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comp(14456..15319)
DNA (864bp) protein (288aa)

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Displaying 19 items

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