ggKbase home page

PLM3-1_170_b2_sep16_scaffold_11930

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_11930_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

63..1265
DNA (1203bp) protein (401aa)
mngA1; mannosyl-3-phosphoglycerate synthase (EC:2.4.1.217)
Mannosyl-3-phosphoglycerate synthase {ECO:0000313|EMBL:AFU58536.1}; EC=2.4.1.217 {ECO:0000313|EMBL:AFU58536.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Mannosyl-3-phosphoglycerate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB22_NITGG
PLM3-1_170_b2_sep16_scaffold_11930_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

1674..2006
DNA (333bp) protein (111aa)
ttuD; hydroxypyruvate reductase (EC:1.1.1.81)
Putative hydroxypyruvate reductase {ECO:0000313|EMBL:AFU58533.1}; EC=1.1.1.81 {ECO:0000313|EMBL:AFU58533.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative hydroxypyruvate reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHV6_NITGG
PLM3-1_170_b2_sep16_scaffold_11930_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2152..3060
DNA (909bp) protein (303aa)
ttuD; hydroxypyruvate reductase (EC:1.1.1.81)
Putative hydroxypyruvate reductase {ECO:0000313|EMBL:AFU58533.1}; EC=1.1.1.81 {ECO:0000313|EMBL:AFU58533.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative hydroxypyruvate reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHV6_NITGG
PLM3-1_170_b2_sep16_scaffold_11930_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(3050..3916)
DNA (867bp) protein (289aa)
birA; biotin-[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:AFU58532.1}; EC=6.3.4.15 {ECO:0000313|EMBL:AFU58532.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Biotin-[acetyl-CoA-carboxylase] ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJT4_NITGG
PLM3-1_170_b2_sep16_scaffold_11930_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4211..4447
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB16_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58531.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_11930_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4449..4685)
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFE0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58530.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_11930_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4696..5913)
DNA (1218bp) protein (406aa)
Putative GTP binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN04_NITGG
GTP binding protein
Putative GTP binding protein {ECO:0000313|EMBL:AFU58529.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_11930_8
unknown

Not on your lists

comp(6223..6366)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_11930_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(6409..6834)
DNA (426bp) protein (142aa)
Putative CoA-binding domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB11_NITGG
CoA-binding domain-containing protein
Putative CoA-binding domain protein {ECO:0000313|EMBL:AFU58526.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_11930_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(6876..7247)
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFD6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58525.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_11930_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(7287..8726)
DNA (1440bp) protein (480aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Amidophosphoribosyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHU9_NITGG
PLM3-1_170_b2_sep16_scaffold_11930_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8843..10282)
DNA (1440bp) protein (480aa)
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoribosylformylglycinamidine synthase 2 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJS1_NITGG
Displaying 12 items

View Taxonomy