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PLM3-1_170_b2_sep16_scaffold_1539

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1539_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1..795
DNA (795bp) protein (265aa)
rtcA; RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
RNA 3'-terminal-phosphate cyclase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDH7_NITGG
PLM3-1_170_b2_sep16_scaffold_1539_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(792..1205)
DNA (414bp) protein (138aa)
Putative copper resistance protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8X2_NITGG
Copper resistance protein CopD
Copper resistance protein CopD {ECO:0000313|EMBL:AIC15548.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_1539_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1256..1753
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II92_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57702.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_trna_1
unknown

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comp(1763..1856)
DNA (94bp)
transferRNA Gly
PLM3-1_170_b2_sep16_scaffold_1539_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1901..2461)
DNA (561bp) protein (187aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFW4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57703.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2462..2791)
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMA7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57704.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2839..4227)
DNA (1389bp) protein (463aa)
UbiD family decarboxylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDI0_NITGG
UbiD family decarboxylase
UbiD family decarboxylase {ECO:0000313|EMBL:AFU57705.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4196..4438)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8X5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57706.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_8
unknown

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comp(4477..4752)
DNA (276bp) protein (92aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1539_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5055..6365)
DNA (1311bp) protein (437aa)
Diphthamide biosynthesis protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFW9_NITGG
diphthamide biosynthesis protein
Diphthamide biosynthesis protein {ECO:0000313|EMBL:AFU57708.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6840..7424)
DNA (585bp) protein (195aa)
Putative signal transduction response regulator, receiver domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INI0_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU59409.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_11

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comp(7571..9001)
DNA (1431bp) protein (477aa)
Putative gas vesicle protein GvpD Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL09_NITGG
gvpD; gas vesicle protein GvpD
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39426.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
PLM3-1_170_b2_sep16_scaffold_1539_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9084..9479)
DNA (396bp) protein (132aa)
cdc48-4; AAA family ATPase, CDC48 subfamily protein (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily protein {ECO:0000313|EMBL:AIC16229.1}; EC=3.6.4.6 {ECO:0000313|EMBL:AIC16229.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Cell division control protein 48, AAA family Tax=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) RepID=B8D3A0_DESK1
PLM3-1_170_b2_sep16_scaffold_1539_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10106..11077)
DNA (972bp) protein (324aa)
Putative ATPase, PP-loop superfamily Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMC3_NITGG
ATPase, PP-loop superfamily
Putative ATPase, PP-loop superfamily {ECO:0000313|EMBL:AFU57764.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11138..11323
DNA (186bp) protein (62aa)
Putative HTH-type transcriptional regulator, AsnC family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG29_NITGG
HTH-type transcriptional regulator, AsnC family
Putative HTH-type transcriptional regulator, AsnC family {ECO:0000313|EMBL:AFU57763.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_15
unknown

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comp(11242..11736)
DNA (495bp) protein (165aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1539_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11891..12118
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I907_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57761.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12242..12646)
DNA (405bp) protein (135aa)
DUF126 domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIB4_NITGG
hypothetical protein
DUF126 domain-containing protein {ECO:0000313|EMBL:AFU57757.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12643..13794)
DNA (1152bp) protein (384aa)
Putative aconitase subunit 1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I906_NITGG
aconitase subunit 1
Putative aconitase subunit 1 {ECO:0000313|EMBL:AFU57756.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13846..14577
DNA (732bp) protein (244aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Endonuclease III Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMC1_NITGG
endonuclease III
PLM3-1_170_b2_sep16_scaffold_1539_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14534..15235)
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG19_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57753.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

15491..16768
DNA (1278bp) protein (426aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I902_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57751.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16938..17240
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDK1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57750.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(17276..17575)
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I928_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57801.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_24
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17609..18007)
DNA (399bp) protein (133aa)
Putative transcriptional regulator, ArsR family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIE0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15493.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_1539_25
Geobacillus sp. GHH01, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(18193..19095)
DNA (903bp) protein (301aa)
hypothetical protein Tax=Bacillus subtilis RepID=UPI0002F7A4A7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGE21909.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. GHH01.;"
PLM3-1_170_b2_sep16_scaffold_1539_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19471..22236
DNA (2766bp) protein (922aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMC0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57749.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(22272..22487)
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG14_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57748.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(22589..22759)
DNA (171bp) protein (57aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG14_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57748.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1539_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(22834..23565)
DNA (732bp) protein (244aa)
Putative archaeal preflagellin peptidase FlaK Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIA8_NITGG
flaK2; archaeal preflagellin peptidase FlaK
Putative archaeal preflagellin peptidase FlaK {ECO:0000313|EMBL:AFU57747.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 31 in total

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