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PLM3-1_170_b2_sep16_scaffold_1574

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1574_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2..211
DNA (210bp) protein (70aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHC8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83382.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_1574_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(334..744)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ING5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59334.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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963..2363
DNA (1401bp) protein (467aa)
hcs; hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:AFU59333.1}; EC=2.3.3.10 {ECO:0000313|EMBL:AFU59333.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Hydroxymethylglutaryl-CoA synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJH9_NITGG
PLM3-1_170_b2_sep16_scaffold_1574_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2364..3617)
DNA (1254bp) protein (418aa)
ilvA; threonine ammonia-lyase (EC:4.3.1.19)
Threonine ammonia-lyase {ECO:0000313|EMBL:AFU59331.1}; EC=4.3.1.19 {ECO:0000313|EMBL:AFU59331.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Threonine ammonia-lyase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID68_NITGG
PLM3-1_170_b2_sep16_scaffold_1574_5
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3663..4625
DNA (963bp) protein (321aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EHG1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14189.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_1574_6

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comp(4652..4924)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKI4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24844.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1574_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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5031..5807
DNA (777bp) protein (259aa)
Beta-lactamase domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C608_SPHTD
Zn-dependent hydrolase, glyoxylase
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM3-1_170_b2_sep16_scaffold_1574_8
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5815..6612)
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E9Q4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA06101.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1574_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6693..7235
DNA (543bp) protein (181aa)
NHL repeat-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJH6_NITGG
resA; NHL repeat-containing protein
NHL repeat-containing protein {ECO:0000313|EMBL:AFU59328.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7255..7842
DNA (588bp) protein (196aa)
NHL repeat-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJH6_NITGG
resA; NHL repeat-containing protein
NHL repeat-containing protein {ECO:0000313|EMBL:AFU59328.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7851..8015)
DNA (165bp) protein (55aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14352.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_1574_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8130..8603
DNA (474bp) protein (158aa)
Nitroreductase-like protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID63_NITGG
nitroreductase-like protein
Nitroreductase-like protein {ECO:0000313|EMBL:AFU59326.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9077..9979
DNA (903bp) protein (301aa)
Major facilitator superfamily MFS-1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL48_NITGG
major facilitator superfamily protein
Major facilitator superfamily MFS-1 {ECO:0000313|EMBL:AFU59322.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9981..10718)
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID59_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59321.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10878..11756
DNA (879bp) protein (293aa)
Putative adenylate/guanylate cyclase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB7_NITGG
adenylate/guanylate cyclase
Putative adenylate/guanylate cyclase {ECO:0000313|EMBL:AFU59320.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11818..12264)
DNA (447bp) protein (149aa)
30S ribosomal protein S9p Tax=Candidatus Nitrososphaera gargensis RepID=K0IJH2_NITGG
rps9p; 30S ribosomal protein S9p
30S ribosomal protein S9p {ECO:0000313|EMBL:AFU59318.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_17
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12261..12707)
DNA (447bp) protein (149aa)
50S ribosomal protein L13 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL44_NITGG
rpl13p; 50S ribosomal protein L13p
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_1574_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12718..13068)
DNA (351bp) protein (117aa)
50S ribosomal protein L18e Tax=Candidatus Nitrososphaera gargensis RepID=K0ID54_NITGG
rpl18e2; 50S ribosomal protein L18e
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13118..13726)
DNA (609bp) protein (203aa)
DNA-directed RNA polymerase, alpha subunit/40 kD subunit (EC:2.7.7.6)
DNA-directed RNA polymerase, alpha subunit/40 kD subunit {ECO:0000313|EMBL:AIF83406.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AIF83406.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
DNA-directed RNA polymerase subunit D Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB5_NITGG
PLM3-1_170_b2_sep16_scaffold_1574_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13890..14579
DNA (690bp) protein (230aa)
Putative ribosome maturation protein SDO1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJH0_NITGG
ribosome maturation protein SDO1
Putative ribosome maturation protein SDO1 {ECO:0000313|EMBL:AFU59313.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_21
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14706..15062
DNA (357bp) protein (119aa)
Putative neutral zinc metallopeptidase Tax=Bacillus sp. SG-1 RepID=A6CQF3_9BACI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16672.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_1574_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15122..15916
DNA (795bp) protein (265aa)
Exosome complex component Rrp4 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL40_NITGG
ecr; exosome complex RNA-binding protein
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_23
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15920..16669
DNA (750bp) protein (250aa)
Exosome complex component Rrp41 {ECO:0000256|HAMAP-Rule:MF_00591}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00591};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Exosome complex component Rrp41 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID49_NITGG
ribosomal RNA-processing protein RRP41/SKI6
PLM3-1_170_b2_sep16_scaffold_1574_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16666..17484
DNA (819bp) protein (273aa)
ecx1; exosome complex exonuclease (EC:3.1.13.-)
Exosome complex component Rrp42 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB2_NITGG
Exosome complex component Rrp42 {ECO:0000256|HAMAP-Rule:MF_00622}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_25
unknown

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comp(17558..17902)
DNA (345bp) protein (115aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1574_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17994..18407
DNA (414bp) protein (138aa)
Prefoldin subunit beta Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID44_NITGG
pfdB; prefoldin, subunit beta
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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18416..19174
DNA (759bp) protein (253aa)
ERCC4-type nuclease (Fragment) Tax=Candidatus Nitrososphaera gargensis RepID=D9ZB89_9ARCH
ERCC4-type nuclease {ECO:0000313|EMBL:ADK25986.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
ERCC4-type nuclease
PLM3-1_170_b2_sep16_scaffold_1574_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(19353..19850)
DNA (498bp) protein (166aa)
Putative nucleotide binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INF9_NITGG
nucleotide binding protein
Putative nucleotide binding protein {ECO:0000313|EMBL:AFU59304.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1574_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19840..20673)
DNA (834bp) protein (278aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG7_NITGG
inorganic polyphosphate/ATP-NAD kinase
PLM3-1_170_b2_sep16_scaffold_1574_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

20767..20976
DNA (210bp) protein (70aa)
thiosulfate sulfurtransferase (EC:2.8.1.1)
Thiosulfate sulfurtransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG1_NITGG
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying 30 items

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