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PLM3-1_170_b2_sep16_scaffold_15882

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_15882_1
unknown

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2..130
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_15882_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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399..989
DNA (591bp) protein (197aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Imidazoleglycerol-phosphate dehydratase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF46_NITGG
PLM3-1_170_b2_sep16_scaffold_15882_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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995..1621
DNA (627bp) protein (209aa)
hisH; imidazole glycerol phosphate synthase (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Imidazole glycerol phosphate synthase subunit HisH Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM44_NITGG
PLM3-1_170_b2_sep16_scaffold_15882_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1618..2319
DNA (702bp) protein (234aa)
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKU0_NITGG
PLM3-1_170_b2_sep16_scaffold_15882_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2319..3086
DNA (768bp) protein (256aa)
hisF; imidazole glycerol phosphate synthase (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Imidazole glycerol phosphate synthase subunit HisF Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INU6_NITGG
PLM3-1_170_b2_sep16_scaffold_15882_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3099..3311
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INU7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59994.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_15882_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3305..3589)
DNA (285bp) protein (95aa)
acyP; acylphosphatase (EC:3.6.1.7)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Acylphosphatase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ12_NITGG
PLM3-1_170_b2_sep16_scaffold_15882_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3640..7185)
DNA (3546bp) protein (1182aa)
AAA family ATPase, CDC48 subfamily protein {ECO:0000313|EMBL:AFU59997.1}; EC=3.6.4.6 {ECO:0000313|EMBL:AFU59997.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
AAA ATPase (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM48_NITGG
PLM3-1_170_b2_sep16_scaffold_15882_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7326..7943
DNA (618bp) protein (206aa)
Putative RNA-binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKU3_NITGG
RNA-binding protein
Exosome complex component Csl4 {ECO:0000256|HAMAP-Rule:MF_00975}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_15882_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

7948..8793
DNA (846bp) protein (282aa)
pheA; prephenate dehydratase (EC:4.2.1.51)
Putative prephenate dehydratase {ECO:0000313|EMBL:AFU59999.1}; EC=4.2.1.51 {ECO:0000313|EMBL:AFU59999.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative prephenate dehydratase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INU8_NITGG
PLM3-1_170_b2_sep16_scaffold_15882_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8790..9176)
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM49_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60002.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_15882_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9289..10746
DNA (1458bp) protein (486aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16068.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_15882_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10738..11823)
DNA (1086bp) protein (362aa)
putative adenylate cyclase (modular protein) (EC:2.7.3.-)
Putative adenylate cyclase (Modular protein) {ECO:0000313|EMBL:AIC17076.1}; EC=2.7.3.- {ECO:0000313|EMBL:AIC17076.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKR4_9ARCH
PLM3-1_170_b2_sep16_scaffold_15882_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11881..12252)
DNA (372bp) protein (124aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Inosine-5'-monophosphate dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ19_NITGG
PLM3-1_170_b2_sep16_scaffold_15882_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12252..13283)
DNA (1032bp) protein (344aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Inosine-5'-monophosphate dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ19_NITGG
PLM3-1_170_b2_sep16_scaffold_15882_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13330..14184)
DNA (855bp) protein (285aa)
Putative dihydropteroate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF65_NITGG
dihydropteroate synthase
Putative dihydropteroate synthase {ECO:0000313|EMBL:AFU60006.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_15882_17
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14285..14866
DNA (582bp) protein (194aa)
arginine decarboxylase (EC:4.1.1.19)
Pyruvoyl-dependent arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01404}; Short=PvlArgDC {ECO:0000256|HAMAP-Rule:MF_01404};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01404};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Pyruvoyl-dependent arginine decarboxylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKU7_NITGG
PLM3-1_170_b2_sep16_scaffold_15882_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14856..15347)
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INV0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60009.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_15882_19
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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15487..15858
DNA (372bp) protein (124aa)
Putative Pyridoxamine 5'-phosphate oxidase Tax=Thaumarchaeota archaeon N4 RepID=V6ATJ3_9ARCH
Putative Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:CDI06036.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
putative Pyridoxamine 5'-phosphate oxidase
PLM3-1_170_b2_sep16_scaffold_15882_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15907..16677)
DNA (771bp) protein (257aa)
Beta-lactamase domain-containing protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDB2_9CHLR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84133.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_15882_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16979..17320
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ33_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60025.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_15882_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17317..18183)
DNA (867bp) protein (289aa)
alcohol dehydrogenase protein (EC:1.1.1.1)
Putative alcohol dehydrogenase protein {ECO:0000313|EMBL:AFU60030.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AFU60030.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative alcohol dehydrogenase protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ35_NITGG
Displaying 22 items

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