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PLM3-1_170_b2_sep16_scaffold_2557_4

Organism: PLM6_170_b2_sep16_Nitrososphaera_viennensis_49_7

near complete RP 30 / 55 MC: 1 BSCG 17 / 51 ASCG 35 / 38
Location: 3814..7635

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 1274.0
  • Bit_score: 2374
  • Evalue 0.0
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 1274.0
  • Bit_score: 2374
  • Evalue 0.0
DNA-directed RNA polymerase Tax=Candidatus Nitrososphaera gargensis RepID=K0IC33_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 1274.0
  • Bit_score: 2374
  • Evalue 0.0

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 3822
ATGCTGGAAGAATCTGCAAAAATTCTGGGCGGAATAAAGTTCAGCGTATGGTCGCCCACTGAAATTCGCAAGTTCTCCGTTGCCGAGGTAACAGCTCCCGAAACATACGACGAAGACGGGATGCCGGTGCAGGGAGGGCTCATGGACAACAGGCTCGGTACGCTTGAGCCGGGGCAAAAGTGTGCGACATGCGGAAATACCTCAGCAAAGTGCCCCGGGCATTTCGGCCACATTGAACTGGCAGAACCGGTGTTGCACATTGCCTTCGTTGACGATATTCACAAGCTGCTCCTGATTACCTGCAGGTCATGCAACAGGATCAAGTTGGATCCGGAGGAGCTTGCAAAGTACAAGGCAGTCCGCGACAAAAAAGCGGCTTATGCAGTCATTACGCTTGAAAATATCAAGGACGAGATAATCGAGCGATCGAAAAAGGTCAAAGCCTGTCCTCACTGCGGCCAGGACCAGTACGACCTCATATTTACAAAGCCGACAATATTCGTGGAAAAGACCGACGCCGGCGAAAACAGGCTTCTGCCTATCACGATCCGCGAAAGGCTGAGCCACGTTCCTGACGACGACCTGACACTTCTTGGGTACGATCCCAAGACAGCAAGGCCGGAGTGGTTTATCCTCCAGGTGCTGCCTGTGCCCCCGGTAACGGTGAGGCCGTCAATTATCCTTGAGACTGGAATTAGGTCCGAAGACGACCTAACACACAAACTTGTCGACATCATCAGGGTCAACCAGCGCCTCAAGGAGAGCAAGGAGGCCGGAACGCCGCCGCTTATTGTCCAGGACTTGGTTGACCTTTTGCAGTACCACGTCACGACCTACTTTGATAACGAGGTTTCGGGCATACCACAGGCCCACCACAGGTCTGGCAGGCCGCTGAAGACGCTCACCCAGAGGCTGAAAGGCAAGGAGGGCAGGTTTAGAGGCTCGCTTTCAGGCAAGCGCGTAGATTTTTCCAGCAGGACGGTGATATCCCCGGATCCCAATCTTCGCATATCCGACGTTGGAGTGCCGACCGATGTCGCGAAAAAACTTACCATCCCTGAAACAGTTTCGCAATGGAACCTTGAAAGGCTAAAGGAGCTTGTAATGAACGGACCGAACGCTTATCCCGGCGCAAACTACATCATCAGACCAGACGGCGTCAAGATCAGGCTGGATTACGTGAGCGACAGGAAGGCCATAGCGGATTCTCTCGCTCCTAGTTACATCGTGGAGCGCCACCTTGCAGACGGCGACATTGTGATCTTTAACAGGCAGCCTTCATTGCACAGAATGTCGATAATGGCACACAGCGTCAGGGTGCTTCCCTACCGAACATTCCGGCTTCATCCCGCCGTGTGCCCACCTTACAACGCAGACTTTGACGGCGATGAAATGAACCTCCATGTGCCTCAGAGCGAAGAGGCGAGGGCAGAGGCTACTCTGCTGATGCGCGTACAGGACCAGCTTATTTCTCCAAGGTACGGGGGACCTATCATCGGCGGAATAAGGGACTTTATCACCGGTGCATTCCTGCTCACTCGCGATGGATCAACGCTCACAAAGGATGAATTTGCAAACCTGGCAATGATCGGAGGCTACAGCGGAACTTTGCCCGAGCCGGCAGCAACTGCAAAGGACGGACAAAAAATGTACGCGGGCAGACAGCTCTTCTCACTTTTCCTGCCCAAGGACTTTAACTTTATCATCACTTCGAAATGGAACAAGGCCGCCAAAGGTGAGGGCAAAGATGTCGTCATCAAAAACGGCCAGCTCATTAGCGGAGTCATTGACAAGGCATCGATAGGCGCAGAAGAACCCGACAGCGTCCTTCACAGAATAGCAAAAGACTATGGCAACGAAACGGCGCGCTCGTTCCTTGACTCGATACTGACGATGCTCAAAACCTACATTACCCACAGGGGATTCAGTTACGGCTATTCAGATCTGTGGCTCAGTCCTGAAACAAACCGGGAGATTAGTGAGATAATTCAAAAGACCTATGAGAAAGTCTATGAGCTCATACAGCAGTACAACGACGGCACGCTGCCCCTGACAAGAGGTCTGTCGGCAGAAGAGGCGCTTGAACTTTATGTCGTCAACGAACTTTCGCGAGCCCGTGACAGGGCGGGCAGAACTGCAGACAGGGCGTTCCCGGACGAAAACTCGGGCGTGATCATGGCATCCACTGGCGCCAGAGGTTCCACTCTCAACATCGGTCAGATGACTGCTGCGCTGGGCCAGCAATCAATCCGGGGCAAAAGAATCCAGAAAGGATATCACAACAGGGCCCTATCACACTTTAAGCCCCGCGACACCAACCCCGATGCGAAGGGTTTTGTAAAGTCGAACTACCGCGACGGCCTCTCGCCGCTGGAATTCTTTTTCCACGCAATGGGCGGAAGGGAAGGCCTTGTAGACACTGCTGTCAGGACGCAGCAGTCAGGCTACATGCAGAGAAGGTTGATCAACGCGCTGGAGCACCTAAAAATAGAATACGACCAGACAGTCAGGGACCCGCACGGGAACATTGTTCAATACCTCTATGGCGAAGACGGTGTAGACCCTGCCAAGAGCGACCACGGCGAGGCTGTCAACATCTCCAGACTTATTGAAGCAGAGTCAGTAATTGATGAAGGTCGCAAGGCCACAGAAAACGACATCAAGAGCATAATTTCAAAATATACAGAACACCTTAACCCGCGCTTGAAGGGCAACCTAGAGAAGGCAATACTTGAGAACAGGCTCAGCAAGGAAGGCGTCGAAAAGGTGATGAAAAAAGTGCTTGATCTCATTGATAGGGCACTGGCGGAGCCGGGAGAAGCAGCCGGGGTCGTAACTGCCCAGTCAATAGGCGAGCCGGGAACCCAGATGACTCTGAGGACCTTCCACTTTGCCGGCGTCAAAGAAAGAAACGTAACGCTCGGCCTGCCAAGGCTGATCGAACTTGTTGACGCGCGCAAAAAGCCGGTGACTCCCACCATGGACATCTATCTCGACCAGGCACACAGGGTGTCAAGAGAACGCGCCCTTGAAATTGCAAGGGAAATTCTTTTCACAGAAATTGGTGCCCTTGTCGACAAGACAGATACTGACTACAGCGGCGTGCTGACGTTCTACCTGTCCGAGGCAAAGCTCAATGAGCGAGCATGCACACTTGCAGATGTCCAAACGGTGCTCGAAGGCTCTAAGAAAAAATACACCATCAAGGTGAATGAAAACAAGCTCTTGATCAAAGTAACGATTCCTGACGAGCCCGACGCGCAGACGCTGCTCACGCTCAAGAGCAAGCTCCTTGGAGCGCGAGTCAAGGGCGTGCCCGATATCGAACGCGTCACGATAGTAAAGCAGGATGAAGAATGGGTCATACAGACAGCCGGCTCTAACCTTGCAAAGGTGGTAGCGGTGGAAGGGGTTGACACGACCAGAACAACCACAAACAATGTTTATGAAATATGGCAGACGCTAGGCATCGAGGCAGCAAGGACTGCGCTTGTAAAGGAAATTAACAATACACTGGAAGAGCAGGGCCTTGAAGTGGACACAAGGCACATCATGCTGGTTGCTGATCTCATGACTTCCAAGGGATATCTTCAACAGATCGGGAGGCACGGAATAGCAGGAACCAAGACCTCGGTCCTTGCAAGGGCTGCATTTGAGATCACAGTGCCAACCATCGCGCGGGCCGCGCTCGAAGGGCAAATCGAGACGCTCAAGGGAGTTACAGAAAACGTTATAGTTGGTGCCACTGTACCAGTCGGCACCGGAATGGTCGATCTTTACATGAAGGTGAAAGATAATGAAAATGCTGGAAAAAGTGATTAA
PROTEIN sequence
Length: 1274
MLEESAKILGGIKFSVWSPTEIRKFSVAEVTAPETYDEDGMPVQGGLMDNRLGTLEPGQKCATCGNTSAKCPGHFGHIELAEPVLHIAFVDDIHKLLLITCRSCNRIKLDPEELAKYKAVRDKKAAYAVITLENIKDEIIERSKKVKACPHCGQDQYDLIFTKPTIFVEKTDAGENRLLPITIRERLSHVPDDDLTLLGYDPKTARPEWFILQVLPVPPVTVRPSIILETGIRSEDDLTHKLVDIIRVNQRLKESKEAGTPPLIVQDLVDLLQYHVTTYFDNEVSGIPQAHHRSGRPLKTLTQRLKGKEGRFRGSLSGKRVDFSSRTVISPDPNLRISDVGVPTDVAKKLTIPETVSQWNLERLKELVMNGPNAYPGANYIIRPDGVKIRLDYVSDRKAIADSLAPSYIVERHLADGDIVIFNRQPSLHRMSIMAHSVRVLPYRTFRLHPAVCPPYNADFDGDEMNLHVPQSEEARAEATLLMRVQDQLISPRYGGPIIGGIRDFITGAFLLTRDGSTLTKDEFANLAMIGGYSGTLPEPAATAKDGQKMYAGRQLFSLFLPKDFNFIITSKWNKAAKGEGKDVVIKNGQLISGVIDKASIGAEEPDSVLHRIAKDYGNETARSFLDSILTMLKTYITHRGFSYGYSDLWLSPETNREISEIIQKTYEKVYELIQQYNDGTLPLTRGLSAEEALELYVVNELSRARDRAGRTADRAFPDENSGVIMASTGARGSTLNIGQMTAALGQQSIRGKRIQKGYHNRALSHFKPRDTNPDAKGFVKSNYRDGLSPLEFFFHAMGGREGLVDTAVRTQQSGYMQRRLINALEHLKIEYDQTVRDPHGNIVQYLYGEDGVDPAKSDHGEAVNISRLIEAESVIDEGRKATENDIKSIISKYTEHLNPRLKGNLEKAILENRLSKEGVEKVMKKVLDLIDRALAEPGEAAGVVTAQSIGEPGTQMTLRTFHFAGVKERNVTLGLPRLIELVDARKKPVTPTMDIYLDQAHRVSRERALEIAREILFTEIGALVDKTDTDYSGVLTFYLSEAKLNERACTLADVQTVLEGSKKKYTIKVNENKLLIKVTIPDEPDAQTLLTLKSKLLGARVKGVPDIERVTIVKQDEEWVIQTAGSNLAKVVAVEGVDTTRTTTNNVYEIWQTLGIEAARTALVKEINNTLEEQGLEVDTRHIMLVADLMTSKGYLQQIGRHGIAGTKTSVLARAAFEITVPTIARAALEGQIETLKGVTENVIVGATVPVGTGMVDLYMKVKDNENAGKSD*