ggKbase home page

PLM3-1_170_b2_sep16_scaffold_4911_10

Organism: PLM6_170_b2_sep16_Nitrososphaera_viennensis_49_7

near complete RP 30 / 55 MC: 1 BSCG 17 / 51 ASCG 35 / 38
Location: comp(7149..7616)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30p Tax=Candidatus Nitrososphaera gargensis RepID=K0ILL3_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 152.0
  • Bit_score: 266
  • Evalue 8.60e-69
rpl30p; 50S ribosomal protein L30p similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 152.0
  • Bit_score: 266
  • Evalue 2.40e-69
50S ribosomal protein L30p {ECO:0000313|EMBL:AFU57149.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 152.0
  • Bit_score: 266
  • Evalue 1.20e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 468
TTGATGCCGATGGCGTACCTGGTAGTCAGAATCAAGGGAACAGTAAACATACCTTATTGGGCTCGGATGACTCTGGACGGGCTTAACCTGGACAGGCGCTTCCGCGCAACGATAGTGCCTGAAAGCCCAGAGTACCTTGGCATGCTCAGGAGGGTAAAAGAGATCGTGGCATGGACAAAAGCCGACGCGGGCATTGTAAAGGAGTTGCTTGAAAAGCGCGGCCGCAAAACCGGCTACAAGCCGCTCACAAGTGCTGATCTGCCCAAAGAATACAAAAACATTGGTGACCTTGCGGCTGCGATCGCGGAGAACAAAGTTTCGATTTCAAAGATCGAAGGCATCAAACCATGGTTTGCGCTTAGCCCGCCAAAGGGCGGATTCAAAAGAAAAACAAAAACGCAGTACACGCAGCAGGGAGTGCTCGGCGACGACAGCGAGCTAGTCGAGATTGTGAAGAGGATGCTATAA
PROTEIN sequence
Length: 156
LMPMAYLVVRIKGTVNIPYWARMTLDGLNLDRRFRATIVPESPEYLGMLRRVKEIVAWTKADAGIVKELLEKRGRKTGYKPLTSADLPKEYKNIGDLAAAIAENKVSISKIEGIKPWFALSPPKGGFKRKTKTQYTQQGVLGDDSELVEIVKRML*