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PLM3-1_170_b2_sep16_scaffold_4911

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_4911_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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123..494
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7I3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57196.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_4911_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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530..787
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57194.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_4911_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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791..1519
DNA (729bp) protein (243aa)
Putative transmembrane protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEK0_NITGG
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AFU57193.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_4911_trna_1
unknown

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comp(1976..2076)
DNA (101bp)
transferRNA Ser
PLM3-1_170_b2_sep16_scaffold_4911_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2342..3412)
DNA (1071bp) protein (357aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.-)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Probable tRNA pseudouridine synthase B Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC89_NITGG
PLM3-1_170_b2_sep16_scaffold_4911_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3409..4005)
DNA (597bp) protein (199aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00239}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Cytidylate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL6_NITGG
cytidylate kinase
PLM3-1_170_b2_sep16_scaffold_4911_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4008..4613)
DNA (606bp) protein (202aa)
Putative membrane protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEC6_NITGG
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFU57153.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_4911_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4618..5214)
DNA (597bp) protein (199aa)
adkA; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00234}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00234};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00234};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00234}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Adenylate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH82_NITGG
PLM3-1_170_b2_sep16_scaffold_4911_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5198..6655)
DNA (1458bp) protein (486aa)
Protein translocase subunit SecY Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7B2_NITGG
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|RuleBase:RU000537}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_4911_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6633..7073)
DNA (441bp) protein (147aa)
50S ribosomal protein L15p Tax=Candidatus Nitrososphaera gargensis RepID=K0IC83_NITGG
rpl15p; 50S ribosomal protein L15p
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_4911_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7149..7616)
DNA (468bp) protein (156aa)
50S ribosomal protein L30p Tax=Candidatus Nitrososphaera gargensis RepID=K0ILL3_NITGG
rpl30p; 50S ribosomal protein L30p
50S ribosomal protein L30p {ECO:0000313|EMBL:AFU57149.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_4911_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7613..8236)
DNA (624bp) protein (208aa)
30S ribosomal protein S5p Tax=Candidatus Nitrososphaera gargensis RepID=K0IEB7_NITGG
rps5p; 30S ribosomal protein S5p
R-protein S5p {ECO:0000313|EMBL:ADK26000.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3-1_170_b2_sep16_scaffold_4911_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8233..8913)
DNA (681bp) protein (227aa)
R-protein L18p (Fragment) Tax=Candidatus Nitrososphaera gargensis RepID=E0A1H9_9ARCH
R-protein L18p {ECO:0000313|EMBL:ADK26035.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
rpl18p; 50S ribosomal protein L18p
PLM3-1_170_b2_sep16_scaffold_4911_13
unknown

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comp(9293..9853)
DNA (561bp) protein (187aa)

This feature has no annotations

Displaying 14 items

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