ggKbase home page

PLM3-1_170_b2_sep16_scaffold_3398

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3398_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1..279)
DNA (279bp) protein (93aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3398_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(282..1250)
DNA (969bp) protein (323aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b2_sep16_scaffold_3398_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1254..2612)
DNA (1359bp) protein (453aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sugar ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3398_4
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

3053..3937
DNA (885bp) protein (295aa)
2-hydroxy-3-oxopropionate reductase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS64_RUBXD
2-hydroxy-3-oxopropionate reductase
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b2_sep16_scaffold_3398_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4238..4849
DNA (612bp) protein (204aa)
RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin5_DeltaP species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin5_DeltaP organism_group=Deltaproteobacteria
ECF subfamily RNA polymerase sigma factor
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3-1_170_b2_sep16_scaffold_3398_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

4882..5127
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YN26_9BACT
transmembrane anti-sigma factor
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3398_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5212..5955)
DNA (744bp) protein (248aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX04206.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Multi-sensor signal transduction histidine kinase bin=GWF2_Geobacter_54_21 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
response regulator receiver protein
PLM3-1_170_b2_sep16_scaffold_3398_8
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6279..6905)
DNA (627bp) protein (209aa)
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQQ4_SIDLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE11290.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
PLM3-1_170_b2_sep16_scaffold_3398_9
unknown

Not on your lists

7090..7206
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3398_10
unknown

Not on your lists

comp(7388..8044)
DNA (657bp) protein (219aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3398_11
unknown

Not on your lists

comp(8335..8541)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3398_12
unknown

Not on your lists

8683..8811
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3398_13
unknown

Not on your lists

comp(8980..9078)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 13 items

View Taxonomy