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PLM3-1_170_b2_sep16_scaffold_3651

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3651_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

910..1230
DNA (321bp) protein (107aa)
Myo-inositol catabolism protein Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCV6_DICT6
myo-inositol catabolism protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3651_2
bacterium UASB270, Bacteria

Not on your lists

1404..1985
DNA (582bp) protein (194aa)
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:GAK60295.1}; species="Bacteria.;" source="bacterium UASB270.;"
extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein bin=bin9_gal15 species=Paenibacillus sp. P22 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
extracellular solute-binding protein
PLM3-1_170_b2_sep16_scaffold_3651_3
bacterium UASB270, Bacteria

Not on your lists

1963..2310
DNA (348bp) protein (116aa)
Uncharacterized protein HI_0131 Tax=Paenibacillus sp. P22 RepID=T2LNV7_9BACL
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:GAK60295.1}; species="Bacteria.;" source="bacterium UASB270.;"
extracellular solute-binding protein
PLM3-1_170_b2_sep16_scaffold_3651_4
bacterium UASB270, Bacteria

Not on your lists

2387..3916
DNA (1530bp) protein (510aa)
Iron(III)-transport system permease protein SfuB Tax=Dialister sp. CAG:357 RepID=R7CQD5_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:GAK60294.1}; species="Bacteria.;" source="bacterium UASB270.;"
ABC transporter permease
PLM3-1_170_b2_sep16_scaffold_3651_5
bacterium UASB270, Bacteria

Not on your lists

3913..5016
DNA (1104bp) protein (368aa)
Fe(3+) ions import ATP-binding protein FbpC Tax=Paenibacillus sp. P22 RepID=T2LP96_9BACL
ABC transporter related {ECO:0000313|EMBL:GAK60293.1}; species="Bacteria.;" source="bacterium UASB270.;"
ABC transporter-like protein
PLM3-1_170_b2_sep16_scaffold_3651_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

5045..5428
DNA (384bp) protein (128aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3651_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

5535..6263
DNA (729bp) protein (243aa)
Serine/threonine kinase Tax=Cystobacter fuscus DSM 2262 RepID=S9Q2E0_9DELT
multi-sensor signal transduction multi-kinase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3651_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6464..7114)
DNA (651bp) protein (217aa)
Uncharacterized protein Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SV99_PLAL2
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3651_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7177..7845)
DNA (669bp) protein (223aa)
peptidase S16; K07157 bin=bin3_NC10 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
ATP-dependent protease La
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3651_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

8152..8703
DNA (552bp) protein (184aa)
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin7_NC10_sister species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
sigma-70 family RNA polymerase sigma factor
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3651_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

8817..9461
DNA (645bp) protein (215aa)
methylated-DNA--protein-cysteine methyltransferase bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
methylated-DNA--protein-cysteine methyltransferase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3651_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9520..10008)
DNA (489bp) protein (163aa)
hypothetical protein bin=GWA2_Ignavibacteria_55_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3651_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10043..10729)
DNA (687bp) protein (229aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_3651_14
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(10951..11352)
DNA (402bp) protein (134aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E0677
NUDIX hydrolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b2_sep16_scaffold_3651_15
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11349..11609)
DNA (261bp) protein (87aa)
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM3-1_170_b2_sep16_scaffold_3651_16
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11884..12171
DNA (288bp) protein (96aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WSZ1_KYRT2
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADG05095.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
PLM3-1_170_b2_sep16_scaffold_3651_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(12696..13118)
DNA (423bp) protein (141aa)
id=14429578 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3651_18
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(13430..14647)
DNA (1218bp) protein (406aa)
transporter Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI00036FB39E
major facilitator superfamily protein
Tax=BJP_IG2069_Chloroflexi_70_12
PLM3-1_170_b2_sep16_scaffold_3651_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(14798..16165)
DNA (1368bp) protein (456aa)
ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene)
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_3651_20
unknown

Not on your lists

comp(16720..17304)
DNA (585bp) protein (195aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3651_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17446..17817)
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMK5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3651_22
unknown

Not on your lists

17910..18524
DNA (615bp) protein (205aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3651_23
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(18534..21035)
DNA (2502bp) protein (834aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMK6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3651_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(21349..22020)
DNA (672bp) protein (224aa)
Putative ABC transporter, ATP-binding protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMK7_9BACT
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3651_25
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22523..22810
DNA (288bp) protein (96aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
PLM3-1_170_b2_sep16_scaffold_3651_26
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

22800..23114
DNA (315bp) protein (105aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_13_RIF03_48_7_curated
PLM3-1_170_b2_sep16_scaffold_3651_27
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

23677..24438
DNA (762bp) protein (254aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJB5_9BACT
Tax=RBG_16_NC10_65_8_curated
Displaying 27 items

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