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PLM3-1_170_b2_sep16_scaffold_3973

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3973_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

2..430
DNA (429bp) protein (143aa)
Uncharacterized membrane protein Tax=Chthonomonas calidirosea T49 RepID=S0EZ62_9BACT
Uncharacterized membrane protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3973_2
GWA2_RIF01_43_8_curated, RIF1, Bacteria

Not on your lists

526..825
DNA (300bp) protein (100aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_RIF01_43_8_curated
PLM3-1_170_b2_sep16_scaffold_3973_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

822..1250
DNA (429bp) protein (143aa)
hypothetical protein bin=bin8_Chloro species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3-1_170_b2_sep16_scaffold_3973_4
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1425..2081)
DNA (657bp) protein (219aa)
hypothetical protein bin=GWB2_Desulfobacterales_56_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB2_Desulfobacterales_56_26_curated
PLM3-1_170_b2_sep16_scaffold_3973_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2464..2772)
DNA (309bp) protein (103aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI000365DE20
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42916.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3-1_170_b2_sep16_scaffold_3973_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

2923..4764
DNA (1842bp) protein (614aa)
ABC transporter, ATPase subunit Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJI3_9BACT
ABC transporter ATPase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3973_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

5000..6514
DNA (1515bp) protein (505aa)
ABC-type multidrug/protein/lipid transport system, ATPase component Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJI2_9BACT
MdlB; ABC-type multidrug/protein/lipid transport system, ATPase component
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3973_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6672..6857)
DNA (186bp) protein (62aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3973_9
unknown

Not on your lists

comp(7024..7425)
DNA (402bp) protein (134aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3973_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7529..8278)
DNA (750bp) protein (250aa)
ribosomal L11 methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] bin=bin3_NC10 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
PUA domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3973_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8271..8675)
DNA (405bp) protein (135aa)
hypothetical protein Tax=Desulfurispora thermophila RepID=UPI0003648919
SAM-dependent methyltransferase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3973_12
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(8663..9451)
DNA (789bp) protein (263aa)
silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-] bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
silent information regulator protein Sir2
Tax=RBG_16_NC10_65_8_curated
PLM3-1_170_b2_sep16_scaffold_3973_13
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9706..10113
DNA (408bp) protein (136aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034CE13F
PilT domain-containing protein
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM3-1_170_b2_sep16_scaffold_3973_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(10291..11406)
DNA (1116bp) protein (372aa)
ald; Alanine dehydrogenase (Stage V sporulation protein N) (EC:1.4.1.1)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183, ECO:0000313|EMBL:CBE70214.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Alanine dehydrogenase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN72_9BACT
PLM3-1_170_b2_sep16_scaffold_3973_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(11678..12499)
DNA (822bp) protein (274aa)
nadE; NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIV6_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3973_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(12503..13390)
DNA (888bp) protein (296aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIY0_9BACT
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3973_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

13505..14101
DNA (597bp) protein (199aa)
hypothetical protein bin=bin3_NC10 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
HEAT repeat-containing PBS lyase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3973_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14087..15556)
DNA (1470bp) protein (490aa)
metal dependent phosphohydrolase bin=bin3_NC10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
cyclic diguanylate phosphodiesterase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3973_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(15586..17196)
DNA (1611bp) protein (537aa)
HEAT-like repeat-containing protein bin=bin3_NC10 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
HEAT-like repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_3973_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17479..17865)
DNA (387bp) protein (129aa)
Primosomal protein N Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJA3_THEM7
primosomal protein N'
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 20 items

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