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PLM3-1_170_b2_sep16_scaffold_2003

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2003_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1..690)
DNA (690bp) protein (230aa)
Multi-sensor signal transduction histidine kinase (EC:2.7.3.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_2003_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(692..2044)
DNA (1353bp) protein (451aa)
response regulator in two-component regulatory system, sigma 54-dependent bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
response regulator in two-component regulatory system, sigma 54-dependent
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_2003_3
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(2450..4108)
DNA (1659bp) protein (553aa)
FAD dependent oxidoreductase bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
FAD dependent oxidoreductase
Tax=CSP1_3_Armatimonadetes
PLM3-1_170_b2_sep16_scaffold_2003_4
unknown

Not on your lists

comp(4252..4578)
DNA (327bp) protein (109aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2003_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4748..5521)
DNA (774bp) protein (258aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK06_RHOMR
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5540..6391)
DNA (852bp) protein (284aa)
Metallo-beta-lactamase superfamily protein bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium CSL144 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
blaB; metallo-beta-lactamase family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6416..6721)
DNA (306bp) protein (102aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

7074..7751
DNA (678bp) protein (226aa)
Putative uncharacterized protein Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DTZ1_SULAA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_9
unknown

Not on your lists

comp(7712..7846)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2003_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8017..8745)
DNA (729bp) protein (243aa)
molybdopterin binding domain-containing protein bin=GWD2_Deltaproteobacteria_55_8 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
molybdopterin binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8852..9295)
DNA (444bp) protein (148aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Paenibacillus dendritiformis genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9620..10156)
DNA (537bp) protein (179aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I bin=GWC2_Nitrospirae_57_13 species=Oscillatoria acuminata genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10168..10494)
DNA (327bp) protein (109aa)
NUDIX hydrolase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
NUDIX hydrolase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_14
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(10592..11182)
DNA (591bp) protein (197aa)
Gll3209 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NGG0_GLOVI
hypothetical protein
Tax=RBG_16_NC10_65_8_curated
PLM3-1_170_b2_sep16_scaffold_2003_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

11477..12163
DNA (687bp) protein (229aa)
Putative glycosyltransferase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6NXS2_9FIRM
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

12345..13016
DNA (672bp) protein (224aa)
id=14429578 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

13117..13929
DNA (813bp) protein (271aa)
short-chain dehydrogenase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
short-chain dehydrogenase
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_2003_18
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

14012..14623
DNA (612bp) protein (204aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00036F6BC6
molybdenum hydroxylase accessory protein, YgfJ family
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b2_sep16_scaffold_2003_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14932..15549)
DNA (618bp) protein (206aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase Tax=Frankia sp. EUN1f RepID=D3CT42_9ACTO
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(15598..16365)
DNA (768bp) protein (256aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L585_THERP
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

16585..17037
DNA (453bp) protein (151aa)
MaoC domain protein dehydratase Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WSR9_RHOS5
dehydratase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_22
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17107..18429)
DNA (1323bp) protein (441aa)
sugar phosphate permease bin=bin7_NC10_sister species=Methyloglobulus morosus genus=Methyloglobulus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sugar phosphate permease
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_23
unknown

Not on your lists

comp(19397..19741)
DNA (345bp) protein (115aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2003_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

20197..20910
DNA (714bp) protein (238aa)
Transposase of ISPca5, Y1_Tnp domain-containing Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A5M4_PELCD
transposase of ISPca5, Y1_Tnp domain-containing
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_25
R_NC10_66_22, NC10, Bacteria

Not on your lists

22274..23059
DNA (786bp) protein (262aa)
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2)
DNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHF2_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_26
R_NC10_66_22, NC10, Bacteria

Not on your lists

23414..24238
DNA (825bp) protein (275aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

24585..25070
DNA (486bp) protein (162aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_170_b2_sep16_scaffold_2003_28
R_NC10_66_22, NC10, Bacteria

Not on your lists

25249..26196
DNA (948bp) protein (316aa)
metalloprotease (EC:3.4.24.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
metalloprotease (EC:3.4.24.-)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2003_29
R_NC10_66_22, NC10, Bacteria

Not on your lists

26422..27189
DNA (768bp) protein (256aa)
asrgl; L-asparaginase (Asparaginase-like protein 1) (EC:3.5.1.1) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
asrgl; L-asparaginase (Asparaginase-like protein 1) (EC:3.5.1.1)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 29 items

View Taxonomy