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PLM3-1_170_b2_sep16_scaffold_2015

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2015_1
R_NC10_66_22, NC10, Bacteria

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2..673
DNA (672bp) protein (224aa)
Deoxynucleoside kinase family protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI68_9BACT
Deoxynucleoside kinase family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2015_2
R_NC10_66_22, NC10, Bacteria

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859..1695
DNA (837bp) protein (279aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9H9_AMMDK
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2015_3
RBG_16_NC10_65_8_curated, NC10, Bacteria

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1802..2647
DNA (846bp) protein (282aa)
panC; pantothenate synthetase (Pantoate--beta-alanine ligase) (EC:6.3.2.1)
Pantothenate synthetase Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHQ1_9FIRM
Tax=RBG_16_NC10_65_8_curated
PLM3-1_170_b2_sep16_scaffold_2015_4
R_OD1_46_25, Parcubacteria, Bacteria

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3196..3450
DNA (255bp) protein (85aa)
AbrB family transcriptional regulator bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
AbrB family transcriptional regulator
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
PLM3-1_170_b2_sep16_scaffold_2015_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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3447..3692
DNA (246bp) protein (82aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b2_sep16_scaffold_2015_6
R_NC10_66_22, NC10, Bacteria

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4035..4466
DNA (432bp) protein (144aa)
Protein MraZ Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI65_9BACT
mraZ; protein mraZ
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2015_7
R_NC10_66_22, NC10, Bacteria

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4806..5177
DNA (372bp) protein (124aa)
Stage II sporulation protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative anti-sigma factor antagonist family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2015_8
R_NC10_66_22, NC10, Bacteria

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5177..6118
DNA (942bp) protein (314aa)
mraW; S-adenosyl-dependent methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI64_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2015_9
R_NC10_66_22, NC10, Bacteria

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6120..6482
DNA (363bp) protein (121aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2015_10
R_NC10_66_22, NC10, Bacteria

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6664..8361
DNA (1698bp) protein (566aa)
ftsI; division-specific transpeptidase, penicillin-binding protein (EC:2.4.1.129) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ftsI; division-specific transpeptidase, penicillin-binding protein (EC:2.4.1.129)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2015_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

8364..9896
DNA (1533bp) protein (511aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase (UDP-N-acetylmuramyl-tripeptide synthetase) (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI61_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2015_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

9909..10568
DNA (660bp) protein (220aa)
Predicted hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI60_9BACT
MhpC; hydrolase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 12 items

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