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PLM3-1_170_b2_sep16_scaffold_2313

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2313_1
R_NC10_66_22, NC10, Bacteria

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3..974
DNA (972bp) protein (324aa)
Radical SAM domain protein bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
radical SAM protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2313_2
R_NC10_66_22, NC10, Bacteria

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1374..2381
DNA (1008bp) protein (336aa)
hypothetical protein Tax=Spirochaeta alkalica RepID=UPI00036C2C47
family 1 extracellular solute-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2313_3
R_NC10_66_22, NC10, Bacteria

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2391..4091
DNA (1701bp) protein (567aa)
hypothetical protein Tax=Spirochaeta alkalica RepID=UPI0003725B07
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2313_4
R_NC10_66_22, NC10, Bacteria

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4137..5270
DNA (1134bp) protein (378aa)
polyamine-transporting ATPase (EC:3.6.3.31)
Polyamine-transporting ATPase Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RW92_SPHGB
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2313_5
R_NC10_66_22, NC10, Bacteria

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5360..5698
DNA (339bp) protein (113aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2313_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5782..6591
DNA (810bp) protein (270aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
UPI0002971993 related cluster bin=GWA2_Methylomirabilis_73_35 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3-1_170_b2_sep16_scaffold_2313_7
unknown

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7169..7630
DNA (462bp) protein (154aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2313_8
R_NC10_66_22, NC10, Bacteria

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7659..9182
DNA (1524bp) protein (508aa)
ABC-type dipeptide transport system, periplasmic component Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WGE3_DESOD
dipeptide ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2313_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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9204..11309
DNA (2106bp) protein (702aa)
Histidine kinase (EC:2.7.13.3)
Histidine kinase,HAMP domain-containing protein,histidine kinase,cache domain-containing protein,GAF domain-containing protein bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. WSM1253 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3-1_170_b2_sep16_scaffold_2313_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11294..11689
DNA (396bp) protein (132aa)
Response regulator receiver protein bin=GWC2_Methylomirabilis_70_16 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
response regulator receiver protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3-1_170_b2_sep16_scaffold_2313_11
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11720..12013
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Rhizobium sp. (strain NGR234) RepID=C3MFG8_RHISN
Uncharacterized protein {ECO:0000313|EMBL:KEC77875.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_2313_12
R_NC10_66_22, NC10, Bacteria

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12248..13276
DNA (1029bp) protein (343aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_2313_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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13483..13743
DNA (261bp) protein (87aa)
id=3884343 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b2_sep16_scaffold_2313_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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14068..14235
DNA (168bp) protein (56aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3-1_170_b2_sep16_scaffold_2313_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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14418..15251
DNA (834bp) protein (278aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2313_16
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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15328..15555
DNA (228bp) protein (76aa)
peroxiredoxin Tax=Salsuginibacillus kocurii RepID=UPI000369527F
bacterioferritin comigratory protein peroxiredoxin
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 16 items

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