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PLM3-1_170_b2_sep16_scaffold_20231

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_20231_1
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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3..1052
DNA (1050bp) protein (350aa)
secretion protein HlyD bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
secretion protein HlyD
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b2_sep16_scaffold_20231_2
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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1064..1789
DNA (726bp) protein (242aa)
ABC transporter, ATPase subunit; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
ABC transporter ATPase
Tax=RBG_16_Aminicenantes_63_16_curated
PLM3-1_170_b2_sep16_scaffold_20231_3
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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1786..2157
DNA (372bp) protein (124aa)
ABC transporter, membrane protein bin=GWC2_Nitrospirae_57_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b2_sep16_scaffold_20231_4
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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2154..2561
DNA (408bp) protein (136aa)
ABC efflux pump, inner membrane subunit; K02004 putative ABC transport system permease protein bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b2_sep16_scaffold_20231_5
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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2563..3738
DNA (1176bp) protein (392aa)
ABC efflux pump, inner membrane subunit bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
efflux ABC transporter inner membrane protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b2_sep16_scaffold_20231_6
R_NC10_66_22, NC10, Bacteria

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3898..4656
DNA (759bp) protein (253aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_20231_7
R_NC10_66_22, NC10, Bacteria

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comp(4840..5634)
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR bin=GWF2_Methylomirabilis_70_14 species=Rhodobacteraceae bacterium HTCC2150 genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acetoin dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_20231_8
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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5981..6340
DNA (360bp) protein (120aa)
formyl transferase Tax=Thermodesulfatator atlanticus RepID=UPI0003B43428
formyl transferase domain-containing protein
Tax=RBG_16_Chloroflexi_60_22_curated
PLM3-1_170_b2_sep16_scaffold_20231_9

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6337..6729
DNA (393bp) protein (131aa)
Phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase Tax=Candidatus Methanomethylophilus alvus Mx1201 RepID=M9SD87_9EURY
Marine sediment metagenome DNA, contig: S03H2_C01507 {ECO:0000313|EMBL:GAH31243.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b2_sep16_scaffold_20231_10
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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6720..7730
DNA (1011bp) protein (337aa)
Putative uncharacterized protein Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RCR1_AMMDK
hypothetical protein
Tax=CG_Dehalo_01
PLM3-1_170_b2_sep16_scaffold_20231_11

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7827..8942
DNA (1116bp) protein (372aa)
Carbohydrate kinase Tax=uncultured candidate division OP1 bacterium RepID=H5SRS2_9BACT
Marine sediment metagenome DNA, contig: S01H1_L00733 {ECO:0000313|EMBL:GAF69297.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
carbohydrate kinase
PLM3-1_170_b2_sep16_scaffold_20231_12
R_NC10_66_22, NC10, Bacteria

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comp(9308..9475)
DNA (168bp) protein (56aa)
Myo-inositol catabolism IolB domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028T0_SOLUE
myo-inositol catabolism IolB domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 12 items

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