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PLM3-1_170_b2_sep16_scaffold_1518

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1518_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3..1469)
DNA (1467bp) protein (489aa)
aldehyde ferredoxin oxidoreductase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1535..2386)
DNA (852bp) protein (284aa)
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein bin=bin3_NC10 species=Nitrobacter hamburgensis genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
sugar ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(2388..3353)
DNA (966bp) protein (322aa)
ABC transporter permease; K02025 multiple sugar transport system permease protein bin=bin7_NC10_sister species=Cupriavidus sp. UYPR2.512 genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3-1_170_b2_sep16_scaffold_1518_4
R_NC10_66_22, NC10, Bacteria

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comp(3591..4634)
DNA (1044bp) protein (348aa)
sugar ABC transporter ATP binding protein; putative glycerol 3-phosphate transport protein, ugpC-like protein (EC:3.6.3.-) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
sugar ABC transporter ATP binding protein; putative glycerol 3-phosphate transport protein, ugpC-like protein (EC:3.6.3.-)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_5
CSP1_5_NC10, NC10, Bacteria

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comp(4966..6312)
DNA (1347bp) protein (449aa)
sugar uptake ABC transporter; K02027 multiple sugar transport system substrate-binding protein bin=bin3_NC10 species=Cupriavidus sp. UYPR2.512 genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
twin-arginine translocation pathway signal
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_1518_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7058..7381)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHK9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7785..8975)
DNA (1191bp) protein (397aa)
CaiB/BaiF family protein bin=bin7_NC10_sister species=Bordetella bronchiseptica genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9104..9739)
DNA (636bp) protein (212aa)
Putative ribonuclease E inhibitor RraA/dimethylmenaquinone methyltransferase Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LHU6_THEPS
ribonuclease E inhibitor RraA/dimethylmenaquinone methyltransferase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10023..10757)
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y930_SORCE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

11274..11423
DNA (150bp) protein (50aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

11420..12145
DNA (726bp) protein (242aa)
peptidase S1C, Do; K01362 [EC:3.4.21.-] bin=bin3_NC10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
peptidase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

12517..13485
DNA (969bp) protein (323aa)
Selenide, water dikinase bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
selenide, water dikinase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

13505..14254
DNA (750bp) protein (250aa)
hypothetical protein bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

14508..15368
DNA (861bp) protein (287aa)
ABC phosphonate-binding periplasmic protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGQ1_9BACT
ABC phosphonate-binding periplasmic protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

15487..16305
DNA (819bp) protein (273aa)
phnC; phosphonates import ATP-binding protein phnC (ABC superfamily, atp_bind) (EC:3.6.3.28)
ABC transporter ATP-binding protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000361AF39
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

16259..17125
DNA (867bp) protein (289aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003788C7F
htxC; phosphite transport system permease protein htxC
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

17127..17999
DNA (873bp) protein (291aa)
Putative PhnE protein, phosphonate ABC transporter, putative membrane protein (Modular protein) bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PhnE protein, phosphonate ABC transporter, putative membrane protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

18259..18699
DNA (441bp) protein (147aa)
Putative Glyoxalase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative glyoxalase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_19
unknown

Not on your lists

19340..19456
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1518_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

19461..20057
DNA (597bp) protein (199aa)
2-deoxy-D-gluconate 3-dehydrogenase Tax=Marinococcus halotolerans RepID=UPI0003B73748
dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1518_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

20243..20998
DNA (756bp) protein (252aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJW4_ROSCS
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 21 items

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