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PLM3-1_170_b2_sep16_scaffold_1705

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1705_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(3..635)
DNA (633bp) protein (211aa)
Putative phosphotriesterase bin=GWC2_Chloroflexi_73_18 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
phosphotriesterase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_170_b2_sep16_scaffold_1705_2
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(666..1472)
DNA (807bp) protein (269aa)
glnQ; glutamine transport ATP-binding protein GlnQ (EC:3.6.3.-)
Amino acid ABC transporter ATP-binding protein, PAAT family Tax=Mycobacterium RepID=A1UHH7_MYCSK
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:KFC64537.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
PLM3-1_170_b2_sep16_scaffold_1705_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1469..2215)
DNA (747bp) protein (249aa)
ABC transporter permease Tax=Oceanicola sp. S124 RepID=UPI0002559742
Putative ABC transporter, permease {ECO:0000313|EMBL:KFC64536.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
amino acid ABC transporter permease
PLM3-1_170_b2_sep16_scaffold_1705_4
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2356..3195)
DNA (840bp) protein (280aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI00031BCD9F
Amino acid ABC transporter {ECO:0000313|EMBL:KJR64388.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
extracellular solute-binding protein family 3
PLM3-1_170_b2_sep16_scaffold_1705_5
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(3563..4576)
DNA (1014bp) protein (338aa)
Aldo/keto reductase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXT4_ROSS1
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ABQ91437.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3-1_170_b2_sep16_scaffold_1705_6
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4599..5927)
DNA (1329bp) protein (443aa)
Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase Tax=Agrobacterium albertimagni AOL15 RepID=K2QX24_9RHIZ
Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:EKF59927.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
PLM3-1_170_b2_sep16_scaffold_1705_7
R_NC10_66_22, NC10, Bacteria

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6281..8500
DNA (2220bp) protein (740aa)
uvrD; DNA helicase II (EC:3.6.1.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
uvrD; DNA helicase II (EC:3.6.1.-)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1705_8
R_NC10_66_22, NC10, Bacteria

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8652..8945
DNA (294bp) protein (98aa)
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLK8_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1705_9
R_NC10_66_22, NC10, Bacteria

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8890..10491
DNA (1602bp) protein (534aa)
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLK7_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1705_10
R_NC10_66_22, NC10, Bacteria

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10549..10929
DNA (381bp) protein (127aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00035E5698
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1705_11
R_NC10_66_22, NC10, Bacteria

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11040..11483
DNA (444bp) protein (148aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036C1FD1
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1705_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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11595..12905
DNA (1311bp) protein (437aa)
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000313|EMBL:CBE67870.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLK4_9BACT
PLM3-1_170_b2_sep16_scaffold_1705_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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13111..13311
DNA (201bp) protein (67aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b2_sep16_scaffold_1705_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13308..13733
DNA (426bp) protein (142aa)
PilT-like protein Tax=Beggiatoa sp. PS RepID=A7C686_9GAMM
PilT domain-containing protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1705_15
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13756..13893
DNA (138bp) protein (46aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B Tax=Smithella sp. ME-1 RepID=V4FHB2_9DELT
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
Displaying 15 items

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