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PLM3-1_170_b2_sep16_scaffold_14082

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_14082_1
R_NC10_66_22, NC10, Bacteria

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2..370
DNA (369bp) protein (123aa)
alias=gwe2_scaffold_1565_14 bin=bin3_NC10 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_2
R_NC10_66_22, NC10, Bacteria

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594..1292
DNA (699bp) protein (233aa)
alias=gwe2_scaffold_1565_13 bin=bin3_NC10 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=bin3_NC10 organism_group=NC10
dinucleotide-utilizing protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_3
R_NC10_66_22, NC10, Bacteria

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1570..2574
DNA (1005bp) protein (335aa)
GntR family transcriptional regulator bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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2653..3204
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V8M0_TERSS
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b2_sep16_scaffold_14082_5
R_NC10_66_22, NC10, Bacteria

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3292..3561
DNA (270bp) protein (90aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_6
unknown

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3599..3832
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_14082_7
R_NC10_66_22, NC10, Bacteria

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3965..4375
DNA (411bp) protein (137aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_8
R_NC10_66_22, NC10, Bacteria

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comp(4387..5403)
DNA (1017bp) protein (339aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLY2_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_9
R_NC10_66_22, NC10, Bacteria

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5856..6731
DNA (876bp) protein (292aa)
mtnA; 5-methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIV7_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_10
unknown

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6757..6966
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_14082_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

6959..9220
DNA (2262bp) protein (754aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIW0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_12
R_NC10_66_22, NC10, Bacteria

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9227..9460
DNA (234bp) protein (78aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] bin=bin1_lowGC species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
phosphomethylpyrimidine kinase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

9477..10049
DNA (573bp) protein (191aa)
Phosphomethylpyrimidine kinase Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7J0_CHLAD
phosphomethylpyrimidine kinase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_14
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

10046..10936
DNA (891bp) protein (297aa)
Putative uncharacterized protein Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RGL6_METVM
hypothetical protein
Tax=RBG_13_Actinobacteria_35_12_curated
PLM3-1_170_b2_sep16_scaffold_14082_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

11186..11800
DNA (615bp) protein (205aa)
coaBC; coenzyme A biosynthesis bifunctional phosphopantothenoylcysteine decarboxylase CoaC/phosphopantothenate--cysteine ligase CoaB (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein coaBC (DNA/pantothenate metabolism flavoprotein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIW2_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

11752..11970
DNA (219bp) protein (73aa)
coaBC; coenzyme A biosynthesis bifunctional phosphopantothenoylcysteine decarboxylase CoaC/phosphopantothenate--cysteine ligase CoaB (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein coaBC (DNA/pantothenate metabolism flavoprotein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIW2_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

12061..12852
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIW4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_14082_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

13034..13537
DNA (504bp) protein (168aa)
Primosomal protein N' (ATP-dependent helicase priA) (Replication factor Y) (EC:3.6.1.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Primosomal protein N' (ATP-dependent helicase priA) (Replication factor Y) (EC:3.6.1.-)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 18 items

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