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PLM3-1_170_b2_sep16_scaffold_12340

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_12340_1
unknown

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comp(1..396)
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_12340_2
unknown

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comp(434..1057)
-----------------
DNA (624bp)
protein (208aa)
id=4504450 bin=GWF2_Bacteroidetes_41_61 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
PLM3-1_170_b2_sep16_scaffold_12340_3
R_NC10_66_22, NC10, Bacteria

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comp(1326..1673)
-----------------
DNA (348bp)
protein (116aa)
RNP-1 like RNA-binding protein (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHE3_9BACT
RNP-1 like RNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_12340_4
unknown

Not on your lists

comp(1834..2457)
-----------------
DNA (624bp)
protein (208aa)
id=4504450 bin=GWF2_Bacteroidetes_41_61 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
PLM3-1_170_b2_sep16_scaffold_12340_5
unknown

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2540..2737
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_12340_6
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(2694..2921)
-----------------
DNA (228bp)
protein (76aa)
Tax=RBG_16_NC10_65_8_curated
PLM3-1_170_b2_sep16_scaffold_12340_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3013..3588)
-----------------
DNA (576bp)
protein (192aa)
hypothetical protein VspiD_21265 bin=GWD2_Deltaproteobacteria_55_8 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Fatty acid hydroxylase superfamily
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_12340_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3638..3943)
-----------------
DNA (306bp)
protein (102aa)
3-oxoacyl-(Acyl-carrier-protein) reductase bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-(acyl-carrier-protein) reductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3-1_170_b2_sep16_scaffold_12340_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4004..4213)
-----------------
DNA (210bp)
protein (70aa)
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 9 items

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