ggKbase home page

PLM3-1_170_b2_sep16_scaffold_42159

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_42159_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3..497)
DNA (495bp) protein (165aa)
Benzoate-CoA ligase family Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M8N8_GEODF
benzoate-CoA ligase family
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_42159_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(679..1785)
DNA (1107bp) protein (369aa)
Benzoyl-CoA oxygenase component B bin=GWD2_Deltaproteobacteria_55_8 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PhaF protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_42159_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1878..2141)
DNA (264bp) protein (88aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
Enoyl-CoA hydratase/isomerase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_42159_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2132..2596)
DNA (465bp) protein (155aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L6T3_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_42159_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2601..3413)
DNA (813bp) protein (271aa)
TetR-family transcriptional regulator bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TetR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_42159_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3549..3932)
DNA (384bp) protein (128aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_42159_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3952..4332)
DNA (381bp) protein (127aa)
3-polyprenyl-4-hydroxybenzoate decarboxylase bin=GWA2_Methylomirabilis_73_35 species=Citrobacter freundii genus=Citrobacter taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 7 items

View Taxonomy