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PLM3-1_170_b2_sep16_scaffold_9827

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_9827_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2..781
DNA (780bp) protein (260aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};; tRNA(Ile2) agmatidine synthetase {ECO:0000256|HAMAP-Rule:MF_01892}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP49_NITGG
putative DNA-binding protein containing a Zn-ribbon domain
PLM3-1_170_b2_sep16_scaffold_9827_trna_1
unknown

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comp(1285..1408)
DNA (124bp)
transferRNA His
PLM3-1_170_b2_sep16_scaffold_9827_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1466..2011)
DNA (546bp) protein (182aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_00077}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
tRNA (cytidine(56)-2'-O)-methyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILG8_NITGG
tRNA ribose 2'-O-methyltransferase
PLM3-1_170_b2_sep16_scaffold_9827_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2011..3105)
DNA (1095bp) protein (365aa)
GTPase HflX Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMM2_NITGG
GTP-binding protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_9827_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3098..3505)
DNA (408bp) protein (136aa)
Putative MBF1 (Multiprotein Bridging factor) Tax=Candidatus Nitrososphaera gargensis RepID=K0IG80_NITGG
MBF1 (multiprotein Bridging factor)
Putative MBF1 (Multiprotein Bridging factor) {ECO:0000313|EMBL:AFU60406.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_9827_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3729..4217
DNA (489bp) protein (163aa)
Putative PUA domain profile Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP29_NITGG
PUA domain profile
Putative PUA domain profile {ECO:0000313|EMBL:AFU60404.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_9827_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4214..4507
DNA (294bp) protein (98aa)
Nascent polypeptide-associated complex protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILG6_NITGG
nascent polypeptide-associated complex protein
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_9827_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4588..4920
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMM0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16082.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_9827_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5000..5620
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG74_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16081.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_9827_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5802..6161
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8X5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15540.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_9827_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6164..7522
DNA (1359bp) protein (453aa)
UbiD family decarboxylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDI0_NITGG
UbiD family decarboxylase
UbiD family decarboxylase {ECO:0000313|EMBL:AFU57705.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_9827_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7640..7960
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMA7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57704.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_9827_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7998..8564
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFW4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57703.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_9827_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9005..9442
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKF3_NITGG
hypothetical protein with integrase-like domain
Uncharacterized protein {ECO:0000313|EMBL:AFU59723.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_9827_14
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9551..9775
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKF3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83256.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Displaying 15 items

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