ggKbase home page

PLM3-1_170_b2_sep16_scaffold_26304

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_26304_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(3..413)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFJ5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF85342.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_26304_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

565..789
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILA5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF85260.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_26304_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

903..1196
DNA (294bp) protein (98aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL37_NITGG
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:AFU60133.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_26304_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2031..3470)
DNA (1440bp) protein (480aa)
leuC1; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000313|EMBL:AFU58411.1}; EC=4.2.1.33 {ECO:0000313|EMBL:AFU58411.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
3-isopropylmalate dehydratase large subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAQ0_NITGG
PLM3-1_170_b2_sep16_scaffold_26304_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

3596..4075
DNA (480bp) protein (160aa)
psmB1; proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {ECO:0000256|HAMAP-Rule:MF_02113}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Proteasome subunit beta Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHL9_NITGG
PLM3-1_170_b2_sep16_scaffold_26304_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(4483..5193)
DNA (711bp) protein (237aa)
ERCC4-type nuclease Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB0_NITGG
ERCC4-type nuclease
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM3-1_170_b2_sep16_scaffold_26304_trna_1
unknown

Not on your lists

comp(5257..5329)
DNA (73bp)
transferRNA Thr
PLM3-1_170_b2_sep16_scaffold_26304_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5475..7163
DNA (1689bp) protein (563aa)
alpha-D-phosphohexomutase (EC:5.4.2.-)
Alpha-D-phosphohexomutase {ECO:0000313|EMBL:AFU57406.1}; EC=5.4.2.- {ECO:0000313|EMBL:AFU57406.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Alpha-D-phosphohexomutase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I807_NITGG
Displaying 8 items

View Taxonomy