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PLM3-1_170_b2_sep16_scaffold_10022

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_10022_1
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2..442)
DNA (441bp) protein (147aa)
aspS1; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AIC14536.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AIC14536.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Aspartyl-tRNA synthetase Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A4I4_NITMS
PLM3-1_170_b2_sep16_scaffold_10022_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(447..956)
DNA (510bp) protein (170aa)
Putative transcription elongation factor NusA Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBY4_NITGG
transcription elongation factor NusA
Putative transcription elongation factor NusA {ECO:0000313|EMBL:AFU58821.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_10022_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1067..2014
DNA (948bp) protein (316aa)
Oligopeptide transport ATP-binding protein OppD Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIG9_NITGG
oppD; peptide/opine/nickel ABC uptake transporter, putative ATP-binding protein
Peptide/opine/nickel ABC uptake transporter, putative ATP-binding protein {ECO:0000313|EMBL:AIC14539.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_10022_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2143..3231
DNA (1089bp) protein (363aa)
fbp; bifunctional fructose-1,6-bisphosphatase (EC:3.1.3.11)
Bifunctional fructose-1,6-bisphosphatase {ECO:0000313|EMBL:AFU57241.1}; EC=3.1.3.11 {ECO:0000313|EMBL:AFU57241.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Bifunctional fructose-1,6-bisphosphatase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7L4_NITGG
PLM3-1_170_b2_sep16_scaffold_10022_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3241..3915
DNA (675bp) protein (225aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Triosephosphate isomerase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG7_NITGG
PLM3-1_170_b2_sep16_scaffold_10022_6
unknown

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comp(3952..4212)
DNA (261bp) protein (87aa)

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Displaying 6 items

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