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PLM3-1_170_b2_sep16_scaffold_10505

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_10505_1
unknown

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comp(1..159)
DNA (159bp) protein (53aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_10505_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(454..1434)
DNA (981bp) protein (327aa)
Putative histone deacetylase superfamily Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY5_NITGG
histone deacetylase superfamily
Putative histone deacetylase superfamily {ECO:0000313|EMBL:AFU60184.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_10505_3
unknown

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1643..1759
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_10505_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1887..2396)
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJT8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60355.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_10505_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2563..3447
DNA (885bp) protein (295aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Protease HtpX homolog Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDJ8_NITGG
protease htpX
PLM3-1_170_b2_sep16_scaffold_10505_6
unknown

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comp(3610..4041)
DNA (432bp) protein (144aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_10505_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4329..4574)
DNA (246bp) protein (82aa)
Zinc finger C2H2 domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II08_NITGG
zinc finger C2H2 domain-containing protein
Zinc finger C2H2 domain-containing protein {ECO:0000313|EMBL:AFU58568.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_10505_8
Opisthorchis viverrini, Opisthorchis, Opisthorchiida, Digenea, Platyhelminthes, Metazoa

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comp(4922..5101)
DNA (180bp) protein (60aa)
Zgc:172007 protein Tax=Danio rerio RepID=A8WGQ9_DANRE
Uncharacterized protein {ECO:0000313|EMBL:KER26896.1}; species="Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Opisthorchiida; Opisthorchiata; Opisthorchiidae; Opisthorchis.;" source="Opisthorchis viverrini.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_10505_9
unknown

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comp(5067..5306)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_10505_10
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5623..5871)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILV4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82090.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_10505_11
RBG_16_Archaea_50_20_curated, Archaea

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comp(5887..6153)
DNA (267bp) protein (89aa)
hypothetical protein
hypothetical protein bin=bin5_DeltaP species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=RBG_16_Archaea_50_20_curated
PLM3-1_170_b2_sep16_scaffold_10505_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(6166..6957)
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIG8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59700.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_10505_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

7219..7563
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IML3_NITGG
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AIC17143.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Displaying 13 items

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