ggKbase home page

PLM3-1_170_b2_sep16_scaffold_38895_1

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_34_6

near complete RP 24 / 55 MC: 2 BSCG 16 / 51 MC: 1 ASCG 31 / 38 MC: 1
Location: comp(440..772)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S25e Tax=Candidatus Nitrososphaera gargensis RepID=K0IKT6_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 106.0
  • Bit_score: 116
  • Evalue 1.00e-23
rps25e; 30S ribosomal protein S25 similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 106.0
  • Bit_score: 116
  • Evalue 2.90e-24
R-protein S25e {ECO:0000313|EMBL:ADK25954.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 106.0
  • Bit_score: 116
  • Evalue 1.40e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 333
ATGGGAGGAGCTAAGAAAAAATCAATAGGAAGTCAAGAAAAGACTTCAAAGGAGAGTCCAGTTGCCGATGACAAATTAAAAAAGGGAGAAAAGAAAGGCGTATTTAAACAAAAACAAAAATCATTAATTGTCATTGAAGAACCTCAAGGTTTAAAGACTTTAAAAAATATGAAACCAATTACTTCACAAGCGTTGGCAAGATCAATGGGTGTAAAGATTTCAGTTGCAAATTCATTCCTACGTTCTCTTGAATCTAAGGGAGTTGTAAAATCAATAGGTGGCTATAGTGGACATAGGATTTATGAACTCGGGTCTATGGAAGCAATACAATAA
PROTEIN sequence
Length: 111
MGGAKKKSIGSQEKTSKESPVADDKLKKGEKKGVFKQKQKSLIVIEEPQGLKTLKNMKPITSQALARSMGVKISVANSFLRSLESKGVVKSIGGYSGHRIYELGSMEAIQ*